Transcript Information: S_Transcript_462019.p1


Annotated TAIR IDAT5G38700.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible, LP.12 twelve leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02170.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:15489690-15490238 | Forward length=182
E-Value2.1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3532034526363
Replicate 21.3711338143088
Replicate 30.41678499623956
Condition 2: 8 Hour
Replicate 10.12048243117024
Replicate 20.2527892501664
Replicate 30.12042851754227
Condition 3: 24 Hour
Replicate 10.12341742085082
Replicate 20.1280441331997
Replicate 30.42749227805281


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_462019.p1 GENE.S_Transcript_462019~~S_Transcript_462019.p1 ORF type:complete len:177 (+),score=36.24,DUF761|PF05553.7|3.6e-10 S_Transcript_462019:140-670(+)
ATGGGAATAAACCAGAGATCATCGTCAGGTAATGGAGCAACCCGCAAAGCTTGGAGGCTCTTGCGCCTGGCCCTGCTATGGGCCAGGAAAGGCGGGTTGCTAAAATGCCGGCTCATGGCGGAGATCCGGCACGTGCCCAAGTACTTAAAGGGCTTAAACCACAACAAGCACTCAAGAGACATGATAAGCTATGGTGAAAGAGAGCTCTCATTTTATGAGACACCAGTCATACACCTTAAAATGAGTAGACCTGCCTCATTAAGGTTCATGATCCCCTGCATCAAGCCTGATGTGGTTGACTTTGACTATGACTTTGCTCACCATGATGATTATCTTGATGATCATGATGTTGGATGGGGATGCTATAACATAGCACATGATCATCATCATTATCATCATCATCATGAAGAGATTGTTAAAGAGAATGAAGAATGTGAAGATGAGATGATTGATGATAAAGCAGAGGAGTTCATTGCTAAGTTCTATCAACAAATAAAGCTCCAAAGAGAGCTCATTTCAAAGAAGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_462019.p1 GENE.S_Transcript_462019~~S_Transcript_462019.p1 ORF type:complete len:177 (+),score=36.24,DUF761|PF05553.7|3.6e-10 S_Transcript_462019:140-670(+)
MGINQRSSSGNGATRKAWRLLRLALLWARKGGLLKCRLMAEIRHVPKYLKGLNHNKHSRDMISYGERELSFYETPVIHLKMSRPASLRFMIPCIKPDVVDFDYDFAHHDDYLDDHDVGWGCYNIAHDHHHYHHHHEEIVKENEECEDEMIDDKAEEFIAKFYQQIKLQRELISKKT*

Click here to download the sequence:
Link to NCBI Protein BLAST