Transcript Information: S_Transcript_462107.p1


Annotated TAIR IDAT1G08620.1
Annotated Gene NameTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Annotated Gene Symbol(s)PKDM7D
Annotation TypeHomolog
Chromosome Positionchr1:2737554-2743370 | Forward length=1209
E-Value3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.067204548573688
Replicate 20.33428469026538
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.05516384719847
Replicate 20.51508662673517
Replicate 30.1273840626521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_462107.p1 GENE.S_Transcript_462107~~S_Transcript_462107.p1 ORF type:3prime_partial len:396 (+),score=13.57,JmjC|PF02373.18|3.9e-37 S_Transcript_462107:68-1252(+)
ATGGAGCCCGATGCTGTCTTCGAGCTTGACGCCCCTCAGTGTCCAGTCTATCATGTCACCCGAGACCAGATCAACTCGACGGACTTCTTGCACTTCGTGCAGAAGGTCTTCCGCAGCAGACCGGACGTACCAATGTTCAAAGTTGTCCCTCCGACGGACTGGAAACCAACGCAGAGGAGACCAAATCTTGACAGCATGACGATTCAGACACCAATCAAGCAGCTGGCGTTTGGCAAGACAGGGTCATATCGCTGTGTACTGGTCGAAGATAAGCCTTGCTCCGTATCCGAGTTCAGAGACATGGCCAACAGCGAAGAGCGGATGCCGCCCGCGAAATGCCGCAAGGACTACAAGATGCTCGAGCGGGCCTTCTGGAAGTCAGTTACCATGAATGCGCCGTTGTACGGGGCTGATACACCTGTAACGCTCTTTGGTCAGCACTGCAAGGGCTGGTCGCTTTGCGATTTGGCTGACCTTCTGAAGCAGAAAGGAGTAGAGGAGATTCCAGGCGTCACCACACCCATGTCGTACTTTGGCATGTGGAAGAGCTTCTTCGCATGGCACATTGAGGACGCAGACCTGTACTCAGTCAACTACCTACACTGGGGCTCTCCCAAAGTGTGGTACTGCGTGCCACCTTCAGGCAAGGCCAAGTTTGAGCGGCTGGCAGCGTGCATGCATCCAGATGCGTACCGTGCGTGCAAAGGCTTCCTGCGGCACAAGGACATCCTGATCTCACCGTCAATTTTGAAACAGTACAATGTCGGCTACCATGTGTGCAAGCAGAACCCTGGCGAGTATGTGGTCCTCAACGCGGCTGCGTACCACTCTGGCTTCAACACTGGCTTCAACGTAGCAGAGGCTGTCAACTTTGCCACTGATGATTGGATAGAGATGGGACGCAAGGCGGTGCCGTGTACATGCGGCGCCATGAGCGACAAAGTGCGCATTGACATGGCCCTTTTCGGCGAGCGCGCTCTGTCTGTCGACTCTCAGTCAGTTACGCGCAGCTCAGACAGCGCAGAGTCAGATGCTGAGGCAGTGTCGTCTGCGTCAGCAGCTGATGCAGAGGCGTCAGGCGGTAGCGACATGTCTGAGTCTGACATTGTCAGCGCAGCAGACAAGCTCGCTGGCAAGCGGGCGCGCACGCCACAGCCGGCACATGCACCAGCTCCCAGCGGCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_462107.p1 GENE.S_Transcript_462107~~S_Transcript_462107.p1 ORF type:3prime_partial len:396 (+),score=13.57,JmjC|PF02373.18|3.9e-37 S_Transcript_462107:68-1252(+)
MEPDAVFELDAPQCPVYHVTRDQINSTDFLHFVQKVFRSRPDVPMFKVVPPTDWKPTQRRPNLDSMTIQTPIKQLAFGKTGSYRCVLVEDKPCSVSEFRDMANSEERMPPAKCRKDYKMLERAFWKSVTMNAPLYGADTPVTLFGQHCKGWSLCDLADLLKQKGVEEIPGVTTPMSYFGMWKSFFAWHIEDADLYSVNYLHWGSPKVWYCVPPSGKAKFERLAACMHPDAYRACKGFLRHKDILISPSILKQYNVGYHVCKQNPGEYVVLNAAAYHSGFNTGFNVAEAVNFATDDWIEMGRKAVPCTCGAMSDKVRIDMALFGERALSVDSQSVTRSSDSAESDAEAVSSASAADAEASGGSDMSESDIVSAADKLAGKRARTPQPAHAPAPSGK

Click here to download the sequence:
Link to NCBI Protein BLAST