Transcript Information: S_Transcript_462285.p1


Annotated TAIR IDAT3G22670.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8017771-8019459 | Reverse length=562
E-Value1E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1774273737875
Replicate 21.1031394778757
Replicate 31.6766123712364
Condition 2: 8 Hour
Replicate 11.9386718470121
Replicate 22.6439457483313
Replicate 31.0657923802491
Condition 3: 24 Hour
Replicate 11.5887187993159
Replicate 23.090519760411
Replicate 32.8661414096723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_462285.p1 GENE.S_Transcript_462285~~S_Transcript_462285.p1 ORF type:internal len:220 (-),score=59.52,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|3e-09,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|7e-10,PPR_2|PF13041.2|0.00023,PPR|PF01535.16|0.075,PPR|PF01535.16|0.037,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|0.0031,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.00066,PPR_1|PF12854.3|55,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|1.9e-07,PPR_1|PF12854.3|0.00016,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|25,PPR_3|PF13812.2|6.1e-05,PPR_3|PF13812.2|0.0054,PPR_3|PF13812.2|4.5e-06,PPR_3|PF13812.2|0.00053 S_Transcript_462285:1-657(-)
GTTGAGGAGATGGATAAATTGGGGGAATTTGTTTCTGTTTCCACGATGACAAAGGTCATGAGAAGGCTTTCACGGGCTAAAAGATATGATGAAGCAATAGAAGCATTTGAGAAATTTGAGCGGTTGGGGGTGACCAAAGACACTGCAGGAATGAACACACTAATGGATAGCTTGGTGAAAGAAAACAGTGTTGAGCATGCCCAAAAGGTGTTTCTGGAATTTAAGGATAGAATACCTCTAAATTCTCGCACCTTCAATATCTTGATTCATGGTTGGTGCAAGTTCAAGAAGTATAATGAAGCAAGGGCAGTTATGGATCAGATGGAGAAGCATGGATGTTGCCCTGATGAGTTATCGTATACTCCCTTTGTTGAGTATTATTGCCGTGAGAAGGATTTTCGAAAGGTTGATGGGATTTTGGATGAGATGCAGCAAAAAGGTTGCCCTCCTAATGTAGTGACTTATACTATTGTTATGGTTGCTTTGGGAAAAGCCAAGGAGATAAATGCAGCTTTGGAAATTTGGGAGAAGATGAAGAGAAGTGGTTGTGCTCCTGATGCCAACTTTTGTAGTGCCTTGATTTTCATCCTGAGCAAATCAGGGAGGTTTAAGGATGCATGTGATCTGTTCAGGGACATGTCAGAGGAGAACGTTGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_462285.p1 GENE.S_Transcript_462285~~S_Transcript_462285.p1 ORF type:internal len:220 (-),score=59.52,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|3e-09,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|2.5e-10,PPR_2|PF13041.2|7e-10,PPR_2|PF13041.2|0.00023,PPR|PF01535.16|0.075,PPR|PF01535.16|0.037,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|0.0031,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|0.00066,PPR_1|PF12854.3|55,PPR_1|PF12854.3|11,PPR_1|PF12854.3|1.5e-08,PPR_1|PF12854.3|0.031,PPR_1|PF12854.3|1.9e-07,PPR_1|PF12854.3|0.00016,PPR_3|PF13812.2|0.38,PPR_3|PF13812.2|25,PPR_3|PF13812.2|6.1e-05,PPR_3|PF13812.2|0.0054,PPR_3|PF13812.2|4.5e-06,PPR_3|PF13812.2|0.00053 S_Transcript_462285:1-657(-)
VEEMDKLGEFVSVSTMTKVMRRLSRAKRYDEAIEAFEKFERLGVTKDTAGMNTLMDSLVKENSVEHAQKVFLEFKDRIPLNSRTFNILIHGWCKFKKYNEARAVMDQMEKHGCCPDELSYTPFVEYYCREKDFRKVDGILDEMQQKGCPPNVVTYTIVMVALGKAKEINAALEIWEKMKRSGCAPDANFCSALIFILSKSGRFKDACDLFRDMSEENVA

Click here to download the sequence:
Link to NCBI Protein BLAST