Transcript Information: S_Transcript_462546.p1


Annotated TAIR IDAT2G17120.1
Annotated Gene Namelysm domain GPI-anchored protein 2 precursor
Annotated Gene Symbol(s)LYM2
Annotation TypeOrtholog
Chromosome Positionchr2:7459156-7460648 | Forward length=350
E-Value3.8E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.135609584325
Replicate 228.593375266539
Replicate 327.098526885504
Condition 2: 8 Hour
Replicate 142.252706681679
Replicate 235.735299560523
Replicate 335.128516853009
Condition 3: 24 Hour
Replicate 117.242894701909
Replicate 216.982749474543
Replicate 317.150990195479


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_462546.p1 GENE.S_Transcript_462546~~S_Transcript_462546.p1 ORF type:5prime_partial len:375 (+),score=60.49,LysM|PF01476.16|1.4e+02,LysM|PF01476.16|1.7e-05,LysM|PF01476.16|3.8e-07 S_Transcript_462546:3-1127(+)
CTCTCCACTTTGTTTTCTTACACCCACCAAGCAAACCCAAAACCTCTCAAAATGACTAAAACCTCTTCTCATCTCCTCCCACATTTACTCTCTCTTCTGACCATCATACTTAGTGCCTCAGCTCAACCACCACCACCATCCTTCAAATGCACAGCAAAATCCACATGTAAAGCTTTAGTTGGCTACACACCCACAAACTCCACAACACTAGGTCACATCCAAACCCTCTTTGAAGTCAAAACCCTTCGTTCAATCCTGGGTGTGAACAACCTCCATCTCTCAACCCCAGCAAATCATGTCATTCCAGCCAATCAAACCCTCAAAATCCCCATTCCTTGCCGTTGTTTCAATGGCACAGGCCTCTCCAATGGGGTCCCACGTTACACTATTGTCAAAGATGATGGGCTTTTCAAAATTGCTAATTTTATCTATGGTGGGCTTGTGACTTACCCACAAATCCAGGCTGCTAATCATATTAAGAACCCTAACTTGATCATTACGGGCCATAAGCTGTGGATCCCACTCCCTTGTAGTTGTGATGAGGTTAATGGTGAGAAAGTGGTCCATTATGCTCATGTTGTGGCCCAAGGAAGTTCTGTTGATGAGATTGCTTCTGAGTTTGGAACTTCGCAACAAACTTTGAGTGTTGTTAATGGGATTTCTGATCCTAAGAAGCTCATGGCTGGTCAAGTTCTTGATGTTCCTCTTAAAGCTTGCAACTCGAGCGTAAACAGCAGCTCCCCTGATTACCCGTTGCTCGTTGCCAATAACACTTATGTTTTCACTGCCAACAACTGTGTGATGTGCAAGTGTGATGCTACCAACAACTTTACGTTGCAATGTCAATCATCTGGACTAAAGCCTATAAACTGGCCAACTTGTCCTGCTGCGCAATGTCCGGATAATCTCTTGCTCGGAAACTCCACAAGTCCTTCGGGCTGCCCCCGATCAACCTGCGCCTACACCGGTTATGGAAACCAAACCATTTTCACAACCCTTGCTGAGGATAACTCTTGTTCTGCATCTGAAGCTCAGAATAATAGAGCATTGAAGAAGAATTTGAGGGGTTGGAGCTTGGCACTTGTATTCCTTTGCACACAGTTGCTGATGATGCAGAGATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_462546.p1 GENE.S_Transcript_462546~~S_Transcript_462546.p1 ORF type:5prime_partial len:375 (+),score=60.49,LysM|PF01476.16|1.4e+02,LysM|PF01476.16|1.7e-05,LysM|PF01476.16|3.8e-07 S_Transcript_462546:3-1127(+)
LSTLFSYTHQANPKPLKMTKTSSHLLPHLLSLLTIILSASAQPPPPSFKCTAKSTCKALVGYTPTNSTTLGHIQTLFEVKTLRSILGVNNLHLSTPANHVIPANQTLKIPIPCRCFNGTGLSNGVPRYTIVKDDGLFKIANFIYGGLVTYPQIQAANHIKNPNLIITGHKLWIPLPCSCDEVNGEKVVHYAHVVAQGSSVDEIASEFGTSQQTLSVVNGISDPKKLMAGQVLDVPLKACNSSVNSSSPDYPLLVANNTYVFTANNCVMCKCDATNNFTLQCQSSGLKPINWPTCPAAQCPDNLLLGNSTSPSGCPRSTCAYTGYGNQTIFTTLAEDNSCSASEAQNNRALKKNLRGWSLALVFLCTQLLMMQRF*

Click here to download the sequence:
Link to NCBI Protein BLAST