Transcript Information: S_Transcript_462572.p1


Annotated TAIR IDAT1G66730.1
Annotated Gene NameDNA LIGASE 6
Annotated Gene Symbol(s)AtLIG6, LIG6
Annotation TypeHomolog
Chromosome Positionchr1:24884991-24891823 | Forward length=1396
E-Value4E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10355253398903
Replicate 20.17169486036977
Replicate 30.21528485700701
Condition 2: 8 Hour
Replicate 10.16595634488041
Replicate 20.34819997882843
Replicate 30.91235145390971
Condition 3: 24 Hour
Replicate 10.084999546656009
Replicate 20.79367433535847
Replicate 30.49070125301782


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_462572.p1 GENE.S_Transcript_462572~~S_Transcript_462572.p1 ORF type:internal len:257 (-),score=53.96,DNA_ligase_A_N|PF04675.10|2.1e+03,DNA_ligase_A_N|PF04675.10|3.6e-11 S_Transcript_462572:3-770(-)
AAATTCTCCCCACTGAAGCCTTCAGTTCGGAGCAGTGTTTCTCCTGGAAAAAGGAGGAGAAATACTGAAAATAAGCATGCTAAGAAGGCCAAAGTTAGTTCAAATCTTCAACCTAGTGGCAAACAATCTACTATAACAAAGTTTTTTAGTAAACATAAAAATGTTTGTCAGGGGAACAATTCTTTAACTGTTTCTGGTAAATGCACTGCTGACAAGAGCTTGTCTGCAGTCCATTCTACCAAACCTTATAAAGAAGAATTGGAGAAATTTATTCAGATCACTAATGGCAGTGAATCAACAAGAAGTTATGCTGCTGAACTCGTAGAAAAGGCCCAAGGAAATATCGAGTTGGCACTGGATATGTATTACAATAATTCTGAGGTACCCATTTGTGATGACCGTAGAGTAGATATTTGCAGCAAATCCATACTTGTTGAAGGCGTCGAACCCAGCTGCTTTAACCTAGGGAAAGAAACCTCTTCTGAACCAGCCTGCTGGAAGCAAGGTCAGCCTGCTCCGTATATACATATGGCACAGACGTTTGACCTCGTTGAAGGTGAAAAGGGCAAACTGAAAGCTACCTCTATGCTTTGCAATATGTTTAGAAGCTTGCTGGCTTTGTCTCCTGAGGACATTCTACCTGCTGTCTATCTCTGCACAAATAAGATTGCCGCTGACCATGAAAATATGGAACTGAACATCGGCGGAAGTTTGGTTGCATCTGCTCTAGAAGAGGCATGTGGGACAAGTAGAGCTAAGATTAGAGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_462572.p1 GENE.S_Transcript_462572~~S_Transcript_462572.p1 ORF type:internal len:257 (-),score=53.96,DNA_ligase_A_N|PF04675.10|2.1e+03,DNA_ligase_A_N|PF04675.10|3.6e-11 S_Transcript_462572:3-770(-)
KFSPLKPSVRSSVSPGKRRRNTENKHAKKAKVSSNLQPSGKQSTITKFFSKHKNVCQGNNSLTVSGKCTADKSLSAVHSTKPYKEELEKFIQITNGSESTRSYAAELVEKAQGNIELALDMYYNNSEVPICDDRRVDICSKSILVEGVEPSCFNLGKETSSEPACWKQGQPAPYIHMAQTFDLVEGEKGKLKATSMLCNMFRSLLALSPEDILPAVYLCTNKIAADHENMELNIGGSLVASALEEACGTSRAKIRE

Click here to download the sequence:
Link to NCBI Protein BLAST