Transcript Information: S_Transcript_462573.p1


Annotated TAIR IDAT1G66730.1
Annotated Gene NameDNA LIGASE 6
Annotated Gene Symbol(s)AtLIG6, LIG6
Annotation TypeHomolog
Chromosome Positionchr1:24884991-24891823 | Forward length=1396
E-Value4E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.23053420104501
Condition 2: 8 Hour
Replicate 10.26656737896416
Replicate 20.13982405399829
Replicate 30.3996721425934
Condition 3: 24 Hour
Replicate 10.27306104363243
Replicate 20.42494646705651
Replicate 30.94582666519185


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_462573.p1 GENE.S_Transcript_462573~~S_Transcript_462573.p1 ORF type:5prime_partial len:160 (+),score=11.48 S_Transcript_462573:2-481(+)
TCTTCTGAACCAGGTAAGAGGGTCCATAAATCAAAAGAAGTAGTATTGGTTGACAATGTAGCTGTTAGCTATATATCATTACCATCGGAAAAGTATCCTCCTATAGATCATGGTGGGTCAATTCTTATCTACTTTTTTTTCCCTTTGTGTTCCTGTGCCTCAATACTAAAACATGCATATATGCATGTGCTTTGTGCAGCCTGCTGGAAGCAAGGTCAGCCTGCTCTGTATATACATATGGCACGGACGTTTGACCTCGTTGAAGGTGAAAAGGGCAAACTGAAAGCTACCTCTATGCTTCGCAATATGTTTAGAAGGTTTTTCTGCTATGCGGCATATCATTCATCATTTCCTTTCTTATGTTCTAATTTGGGAGCTGATATATTAGTGTTGTTCCATGTGGCACTTGTTTCTTTTTTGCATTCCTCTAATCTTTGGAAAGACTTTCAAAAAAAAAACTTCCTGGAGCTTAAATTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_462573.p1 GENE.S_Transcript_462573~~S_Transcript_462573.p1 ORF type:5prime_partial len:160 (+),score=11.48 S_Transcript_462573:2-481(+)
SSEPGKRVHKSKEVVLVDNVAVSYISLPSEKYPPIDHGGSILIYFFFPLCSCASILKHAYMHVLCAACWKQGQPALYIHMARTFDLVEGEKGKLKATSMLRNMFRRFFCYAAYHSSFPFLCSNLGADILVLFHVALVSFLHSSNLWKDFQKKNFLELKL*

Click here to download the sequence:
Link to NCBI Protein BLAST