Transcript Information: S_Transcript_46265.p1


Annotated TAIR IDAT3G09650.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)HCF152, CRM3
Annotation TypeOrtholog
Chromosome Positionchr3:2958704-2961040 | Forward length=778
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.687418462253
Replicate 239.397838495562
Replicate 344.960267992164
Condition 2: 8 Hour
Replicate 137.545098560984
Replicate 239.417066650947
Replicate 339.558378557922
Condition 3: 24 Hour
Replicate 153.918720361705
Replicate 251.922912235759
Replicate 349.409851539652


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46265.p1 GENE.S_Transcript_46265~~S_Transcript_46265.p1 ORF type:complete len:756 (+),score=160.05,PPR_2|PF13041.2|5.9e+03,PPR_2|PF13041.2|2.4e+03,PPR_2|PF13041.2|8.4e-11,PPR_2|PF13041.2|3.8e+02,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|7.8e-15,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|7.1e-14,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|4.2e-13,PPR_2|PF13041.2|9.2e+03,PPR_2|PF13041.2|9.9,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|0.0058,PPR|PF01535.16|0.2,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.0046,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|7.6e-05,PPR|PF01535.16|0.00061,PPR|PF01535.16|6.9e-09,PPR|PF01535.16|2.5,PPR|PF01535.16|9.8,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|5.4,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|4.2e-07,PPR_1|PF12854.3|1e-07,PPR_1|PF12854.3|0.00028,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|1.2,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|2.6e-07,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|6.8e-05,PPR_3|PF13812.2|0.00089,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|1.1,SPOB_a|PF14689.2|5.1e+03,SPOB_a|PF14689.2|60,SPOB_a|PF14689.2|0.19,SPOB_a|PF14689.2|1.8 S_Transcript_46265:118-2385(+)
ATGAATACCAAATTCCCAACCCCATCTTCTTCAACCTCAACTTCAACCTCCTTACCACTCACCTCTACCAGTTTCCCAGCTTTCCTCCGAGTAGTATCTGCATCTCCACCACTTTCAAATTCAATCTCCACCCACAGCCACAGCAACCGACCTCAATCATCCATCACCACTGCGACTACAAACCCAACTCCTCCTCCTACTACTACTACAAAGCACCTTGATCAAACCCTGCTTTCTCTCCTTCAGCGCAGGCAAACTGAACAAGCTTGGCTCTTTTACTCCCAATTACCTCATCTCCCTAACCCCACTTGCCTTAGTCGTTTAGTCTCTCAACTTTCTTATCAAAATACTCCTCTCTCCTTCTCCCGTGTTCAATCCATTGTCTCTCGTCTCAGACATGAATCTCAACTTCACCGCCTTGATTCCAACTCTCTTGGCTTATTGGCTGTCTCTGCTCTTAAATTTGGTCATACCCTCTATGCCCTTTCCATTATTAAGTCTATGCTTCGCTCTAATTATCTTCCCTATGTTAAGGCTTGGAGTGCTCTAGTTAGCCGCCTTTCTGCTTCCCCTGATGATGCTCCTCTCGAGTCTATACGCCTCTTTGAGCTAATTGCCAACCGGGTTCAAACCCATGTCGACAATCCAGCCCTCGTGGCCCACTCCAAACCCGACACCGCCGCCTTCAATGCTGTCCTCAATGCCTGTGCCAATATGGGCGACATTGATAAGTTCCACCAACTGTTTGATCAAATGCCTGAGTTCCAAGTTATGCCTGATGCTCTTACTTATAATGTTATGATTAAGTTATGTGCTAGAGTTGATAGGAAGGACCTGCTTGTTTGTGTGTTGGAGTTGATGTTGAGTAAAGGGGTTGAGCCTTGTGTTACTACCTTGCATTCTCTTGTTGCTGCTTATGTTGGTTTCGGTGAGTTGGGCGTCGCGGAGCAGTTGGTCCAAGCATTGCGTGATGGGAGGACCGATGTGTGTAGGGTTCTGAGGGATGCAAATGCTGGTGAGGATGAGCTTGATGAGGATGTGATTGATCATAGTGAACAAGACAAGTGTGAAAATGATGTGTTTGAGAAGTTGCTTCCTAGTGTGATTCGTGTGAGTTCAGAGCCACCTCCATTATTGCCTAGATCATATTCGCCAAATTCTAGGATGTATACGACGTTGATGAAGGGATACATGAAAGCGGGAAGAGTAGCTGAAACAGTGAGGATGCTTGAGGCAATGAGGTGTCAGGAGGATAGTGCTAGCCATCCTGATCATGTCTCCTATACAACAGTGATTTCGGCTTTTGTCAAAGCAGGATCAATGGACAAGGCCAGGCAGGTCCTCGCTGAAATGACGAGAATCGGTGTGCCAGCTAATCGTATCACATATAATATTCTGCTCAAGGGTTATTGCCAGCAGTTGCAAATTGATAAAGCAAAGGAATTGATCAAGGAGATGGCTAATGATGTTGAGATTTCGCCTGATGTGGTGTCATACAATACATTGATTGATGGGTGCATATTGGTGGATGATAGTGCAGGAGCTCTCGCATTCTTCAATGAGATGAGAGCACGAGGAATTGCTCCGACAAAAATTAGTTACACCACTTTGATGAAGGCTTTTGCCTTGTCTGGGCAACCGAAATTGGTAAACAAGGTGTTTGATGAGATGCTGAAGGATCCAAGGGTAAAAGTTGATCAGGTTGCTTGGAATATGTTGATTGAAGGTTACTGCAAGATGGGTTTAATCGAGGAAGCCAAGAAGATTGTCGAGAGAATGAGGGAGCACGGGTTTCACCCTAATGTTGCCACGTATGGGAGCCTTGCTAATGGAATTGCGTTAGCAAGGAAGCCAGGTGAAGCATTACTTCTTTGGAATGAAGTGAAGGAGAGATGTGCAGCAAGGGGAGAAAAAGATGAGTTGGAATCTTCATTGCCACCACCAATAAAGCCTGATGAAGGGCTACTAGATACTTTAGCTGATATTTGTGTAAGAGCCGCCTTTTTCAAGAAAGCATTGGAGATTGTGGCATGCATGGAAGAGAACGGATTTTCACCAAATAAGACCAAATTTACAAGGATTTATGTTGAGATGCACTCTAGGATGTTTACAAGTAAGCATGCATCTAAAGCCAGGCAAGATAGAAGACGCGAGAGGAAGAGGGCAGCAGAAGCATTCAAATTTTGGTTGGGATTGCCCAACGATTATTATGCAAGTGAATGGAGTCTTGATCCAGGTGATCGTGATTATGAATCTGAATCTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46265.p1 GENE.S_Transcript_46265~~S_Transcript_46265.p1 ORF type:complete len:756 (+),score=160.05,PPR_2|PF13041.2|5.9e+03,PPR_2|PF13041.2|2.4e+03,PPR_2|PF13041.2|8.4e-11,PPR_2|PF13041.2|3.8e+02,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|7.8e-15,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|7.1e-14,PPR_2|PF13041.2|0.12,PPR_2|PF13041.2|4.2e-13,PPR_2|PF13041.2|9.2e+03,PPR_2|PF13041.2|9.9,PPR|PF01535.16|7.6e+02,PPR|PF01535.16|0.0058,PPR|PF01535.16|0.2,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.0046,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|7.6e-05,PPR|PF01535.16|0.00061,PPR|PF01535.16|6.9e-09,PPR|PF01535.16|2.5,PPR|PF01535.16|9.8,PPR_1|PF12854.3|0.19,PPR_1|PF12854.3|5.4,PPR_1|PF12854.3|1.4e+03,PPR_1|PF12854.3|1.2e-06,PPR_1|PF12854.3|4.2e-07,PPR_1|PF12854.3|1e-07,PPR_1|PF12854.3|0.00028,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|3e-08,PPR_1|PF12854.3|1.2,PPR_3|PF13812.2|3.7e+03,PPR_3|PF13812.2|0.00017,PPR_3|PF13812.2|0.54,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|2.6e-07,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|0.0021,PPR_3|PF13812.2|6.8e-05,PPR_3|PF13812.2|0.00089,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|1.1,SPOB_a|PF14689.2|5.1e+03,SPOB_a|PF14689.2|60,SPOB_a|PF14689.2|0.19,SPOB_a|PF14689.2|1.8 S_Transcript_46265:118-2385(+)
MNTKFPTPSSSTSTSTSLPLTSTSFPAFLRVVSASPPLSNSISTHSHSNRPQSSITTATTNPTPPPTTTTKHLDQTLLSLLQRRQTEQAWLFYSQLPHLPNPTCLSRLVSQLSYQNTPLSFSRVQSIVSRLRHESQLHRLDSNSLGLLAVSALKFGHTLYALSIIKSMLRSNYLPYVKAWSALVSRLSASPDDAPLESIRLFELIANRVQTHVDNPALVAHSKPDTAAFNAVLNACANMGDIDKFHQLFDQMPEFQVMPDALTYNVMIKLCARVDRKDLLVCVLELMLSKGVEPCVTTLHSLVAAYVGFGELGVAEQLVQALRDGRTDVCRVLRDANAGEDELDEDVIDHSEQDKCENDVFEKLLPSVIRVSSEPPPLLPRSYSPNSRMYTTLMKGYMKAGRVAETVRMLEAMRCQEDSASHPDHVSYTTVISAFVKAGSMDKARQVLAEMTRIGVPANRITYNILLKGYCQQLQIDKAKELIKEMANDVEISPDVVSYNTLIDGCILVDDSAGALAFFNEMRARGIAPTKISYTTLMKAFALSGQPKLVNKVFDEMLKDPRVKVDQVAWNMLIEGYCKMGLIEEAKKIVERMREHGFHPNVATYGSLANGIALARKPGEALLLWNEVKERCAARGEKDELESSLPPPIKPDEGLLDTLADICVRAAFFKKALEIVACMEENGFSPNKTKFTRIYVEMHSRMFTSKHASKARQDRRRERKRAAEAFKFWLGLPNDYYASEWSLDPGDRDYESESL*

Click here to download the sequence:
Link to NCBI Protein BLAST