Transcript Information: S_Transcript_462710.p1


Annotated TAIR IDAT5G28780.1
Annotated Gene NamePIF1 helicase
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:10812907-10814173 | Reverse length=337
E-Value9E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.1431234249472
Replicate 20
Replicate 30.28611875979841
Condition 3: 24 Hour
Replicate 10
Replicate 20.15210611796206
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_462710.p1 GENE.S_Transcript_462710~~S_Transcript_462710.p1 ORF type:internal len:149 (+),score=11.29,PIF1|PF05970.10|1.1e-12,Herpes_Helicase|PF02689.10|9.2e-06 S_Transcript_462710:3-446(+)
TTTCCTAACCATGAACTTATATTGAAAGAAGGTGCTCCAGTTATGCTTCTCAGGAATATTGATTGCTCTGGTGGTTTATGTAATGGCACACGATTACGTATAACCAAATTGGGCAATAATGTTATTGAAGCAGAGGTTCTCACTGGAAGTAAGATTGGCAACAAGGTCTTCGTACCCCGCTTCTCACTCACACCATCTGATACACGTTTGCCGTTCAAGTTTAGCAGGCAGCAGTTCCCTATTAGAATATGTTTTGCAATGACTATTAATAAAAGTCGGGGACAATCGCTTGAACGTGTTGGTGTATATTTACCTACACCTGTTTTCACGCATGGTCAGCTTTATGTTGCCATCTCACGTGTTACTAACAGGAAAGGCCTCAAATTTCTGATATTAGATAATGACGACAAACCATGTAATAAAACAATCAATGTAGTGCAGATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_462710.p1 GENE.S_Transcript_462710~~S_Transcript_462710.p1 ORF type:internal len:149 (+),score=11.29,PIF1|PF05970.10|1.1e-12,Herpes_Helicase|PF02689.10|9.2e-06 S_Transcript_462710:3-446(+)
FPNHELILKEGAPVMLLRNIDCSGGLCNGTRLRITKLGNNVIEAEVLTGSKIGNKVFVPRFSLTPSDTRLPFKFSRQQFPIRICFAMTINKSRGQSLERVGVYLPTPVFTHGQLYVAISRVTNRKGLKFLILDNDDKPCNKTINVVQI

Click here to download the sequence:
Link to NCBI Protein BLAST