Transcript Information: S_Transcript_46317.p1


Annotated TAIR IDAT1G26370.1
Annotated Gene NameRNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:9122030-9125368 | Reverse length=717
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9246205745547
Replicate 28.5334277472807
Replicate 37.5742319780751
Condition 2: 8 Hour
Replicate 16.7785347562195
Replicate 27.174094922444
Replicate 37.1052825349938
Condition 3: 24 Hour
Replicate 16.974386149599
Replicate 25.1320304694683
Replicate 35.2856323718176


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46317.p1 GENE.S_Transcript_46317~~S_Transcript_46317.p1 ORF type:complete len:711 (+),score=148.70,OB_NTP_bind|PF07717.12|8.3e+03,OB_NTP_bind|PF07717.12|6.4e-23,HA2|PF04408.19|2.8e-18,Helicase_C|PF00271.27|1.9e-12 S_Transcript_46317:218-2350(+)
ATGCCGTCAATGACGAACCCACAAGTTCATCGTCCCAACGGTGCCGTTTCAAACAACAACGACTTCAGGCGGCAAAAGATTTTGGAGCAGAGAAAATCACTCCCCATTGCAGCTGTTGAGAAGCGGTTAGTGGAGGAAGTTCACAATCACCATACCTTGATTATTGTTGGTGAGACTGGAAGTGGCAAAACTACTCAATTGCCTCAATTTCTGTTCAAAGCGGGGTTCAGTCGTGAAGGCAAAGTGATAGGGATTACTCAGCCTAGACGGGTTGCTGCTGTCACTGTGGCAAAGCGAGTGGCTGAAGAATGCGGTGGGCAAGTAGGGCAAAGGGTTGGATACTCTATTAGATTTGATGACATCACTTCACCTTCAACGAGGATCAAGTACATGACTGATGGGTTGTTATTGAGGGAGGCATTATTGGACCCTTACCTATCAAAGTACTCAGTAATTATTGTTGATGAAGCTCATGAGAGAACTGTTCACACTGATGTGTTGCTAGGCTTGTTGAAAAAGGTACAGAAAGCAAGATCTGAAACTAAAGTTGAGTCCCCAAATGCTGAGGGTACAAAGACAAATGGTGATATAAAGCTGGACAAAGCACAAGGGGCTCACCTGGCCAGGCCTCTGAAGCAATGTCAGGGTGCAAAGCTTCCACCATTGAGACTGATTATTATGTCTGCCAGTTTAGATGCACGGATTTTCTCTGAGTACTTTGGTGGTGCTAGAGCTGTTCATGTTCAAGGAAGACAGTTCCCTGTAGACATATATTATACTATGCATGCCGAGTCCGATTACATTGAAGCAGCAATAACAACAATATTCCAGATTCATCTAGATGAGGCTCCAGGTGACATACTTGTATTTTTGACTGGTCAAGAAGAGATCGAAGCTGTTGAGGGGCTCGTGAAGGAGAAAATGCACCAATTACCTAAGGAAAACCAAAACCTTTTGATCGTTCCTATTTTTGCTTCTCTTCCCTCAGAACAGCAAATGAAAGCTTTCATGCCTGCGCCAAAGGGGCTTCGTAAGGTAATATTGGCAACAAATATTGCTGAGACATCAGTGACGATACCAGGAATTAAGTATGTTGTAGACCCTGGAGTGGTAAAAGCACGCCATTATAATCCACGAACAGGAATAGAATCATTGAATATAATTCCTACTTCGAAAGCACAGGCTCTTCAAAGGAGTGGACGTGCAGGGCGTGAAGGACCTGGAAAATGTTTCCGCCTCTACCCTGAAAGTGAATTTGAGAAACTTGCGGATTCAACTGTGCCAGAAATTAAGCGATGCAACCTTTCAAATGTCATTTTGCAGCTTAAAGCTCTAGGGGTTGATGATATTATTGGATTTGATTTCATGGAAAAACCTTCAAGAATGGCTATTGTGAAATCCTTGGAAGAATTATTATTGCTTGGTGCTCTAACGGAGCATTACAAGCTCTCTGATCCGATTGGACACCAGATGGCCAGACTTCCATTAGATCCTGTTTATTCCAAGGCCCTCATCGTAGCTAGTCAATTCAACTGTTTGGAGGAAATGCTAATAACTGTCGCAATGCTCTCTGTGGAATCAATATTTTATACACCACGTGAAAAGCACGAGGAGTCAGCAGCTGCAATAAAACGTGTTTCAAGTCCTGAAGGAGACCACATTACATACATTAATGTGTATAGATCTTTTGATGATTTCTTGGAGAAGAGCAATGTGGATGGCAGCAAGGAGAAAACTCTCAAGAATATGAGGAAGTGGTGCAAAGAAAATGTTGTTAATGGTCGCTCCTTAAGACATGCTCGTGATGTCCACAGCCAAATTCGAGGTCATGTTGAACAAATGGGCCTTCGTATTGCTTCCTGTGGAGAAGATCTGCTTCTGTTCCGCAGATGCCTTGCTGCTTCATTTTTCATGAATGCTGCTTTGAAACAGCCTGATGGTACCTATAGGGCTTTGGCAAGTGGTCAGGTGGTGCAAATTCACCCTACTTCAGTGTTATGCCGGGCAAAACCAGACTGCATAATATTCAATGAACTGGTCCGAACTAATAAGACTTATATCCGCAATGTTACTAGAATTGATCCTTTGTGGTTGGCAGAGCTGGCTCCTCATTTCTATGCTACACAAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46317.p1 GENE.S_Transcript_46317~~S_Transcript_46317.p1 ORF type:complete len:711 (+),score=148.70,OB_NTP_bind|PF07717.12|8.3e+03,OB_NTP_bind|PF07717.12|6.4e-23,HA2|PF04408.19|2.8e-18,Helicase_C|PF00271.27|1.9e-12 S_Transcript_46317:218-2350(+)
MPSMTNPQVHRPNGAVSNNNDFRRQKILEQRKSLPIAAVEKRLVEEVHNHHTLIIVGETGSGKTTQLPQFLFKAGFSREGKVIGITQPRRVAAVTVAKRVAEECGGQVGQRVGYSIRFDDITSPSTRIKYMTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLLGLLKKVQKARSETKVESPNAEGTKTNGDIKLDKAQGAHLARPLKQCQGAKLPPLRLIIMSASLDARIFSEYFGGARAVHVQGRQFPVDIYYTMHAESDYIEAAITTIFQIHLDEAPGDILVFLTGQEEIEAVEGLVKEKMHQLPKENQNLLIVPIFASLPSEQQMKAFMPAPKGLRKVILATNIAETSVTIPGIKYVVDPGVVKARHYNPRTGIESLNIIPTSKAQALQRSGRAGREGPGKCFRLYPESEFEKLADSTVPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRMAIVKSLEELLLLGALTEHYKLSDPIGHQMARLPLDPVYSKALIVASQFNCLEEMLITVAMLSVESIFYTPREKHEESAAAIKRVSSPEGDHITYINVYRSFDDFLEKSNVDGSKEKTLKNMRKWCKENVVNGRSLRHARDVHSQIRGHVEQMGLRIASCGEDLLLFRRCLAASFFMNAALKQPDGTYRALASGQVVQIHPTSVLCRAKPDCIIFNELVRTNKTYIRNVTRIDPLWLAELAPHFYATQD*

Click here to download the sequence:
Link to NCBI Protein BLAST