Transcript Information: S_Transcript_463288.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.11990646498649
Replicate 30.050116130661958
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.059361096441832
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_463288.p1 GENE.S_Transcript_463288~~S_Transcript_463288.p1 ORF type:3prime_partial len:368 (-),score=25.47,RVT_1|PF00078.23|9.7e-44 S_Transcript_463288:2-1102(-)
ATGTACCCCTACAAAGCACCGGGGCCCGATGGTTTTCAAGCAGTGTTCTTCCAGAAACAGTGGGAAGTGGTGGGCGAGAGTTTATGCGATACAGTTCTCAAAGTGCTGCAAGGCACGAGTTTCCCTGAAGGACTCAATGAGACCTTCGTGGTATTAATACCAAAGGTGGACGTTCCAGAACGTGTAACGCAATTTCGGCCGATAAGTCTTTGTAATGTGGTATACAAGGTCATAACTAAGGCAATTGTTAATAGACTTAAGCCAATCTTGCCCCACATGATCTCCCCTACCCAAGGGTCTTTTGTTCCGGGAAGACAGATCACAGATAACATCATCATAGTGCAAGAAGCAATTCACACCATGAGGCGTAAAAAAGGCACAACTGGTTTCATGGCCATCAAAATTGACCTGGAAAAAGCCTATGATAGATTGCGGTGGGACTTCATAAGGGAAACACTACAAGAGATGCAGATTCCTATTCTTCTCAGGGAAGTGATCATGCTTTGTATCACCACACCTACTATGCGAGTATTATGGAATGGGGAGCCTTCGGAAGTTTTTCAACCATCTCGAGGCATTCGCCAGGGGGACCCACTCTCCCCATACATTTTCGTGATGTGCATGGAACGGCTCGCCCATATCATCGAGGAGGCGGTGGGTACAAATTTGTGGAAACCAATTGAATGCAGTAAAGGGGGCCCGAAGCTATCGAACTTATTCTTTGCAGATGACGTGGTGCTCTTTGCTGAAGCTACAATGGAGCAAGCACAAATTGTAAGGCAATGCCTAGATAGATTTTGCCAAGCTTCTGGGGAACTAGTTTCTTATACAAAGTCAAGGGTCTTCTTCTCTGCCAATGTGGATGAACTAAAAGCAACGAGGATAAGTGACTGCCTACAGATTGAGCCCACGAATGACTTGGGATTCTACCTTGGAATGCCGACAATCCACGGCCGGACCACTAAGGCAACATACAACCACATACTGGAAAAGATGGATGCTAAGCTACAAGGGTGGAAGTCTAAGTGCCTCTCTCTTGCTGGGAGAATTACCCTTACGAAATCAGTTTTGTCCTCCCTGTCCTACTACTCAATGCAAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_463288.p1 GENE.S_Transcript_463288~~S_Transcript_463288.p1 ORF type:3prime_partial len:368 (-),score=25.47,RVT_1|PF00078.23|9.7e-44 S_Transcript_463288:2-1102(-)
MYPYKAPGPDGFQAVFFQKQWEVVGESLCDTVLKVLQGTSFPEGLNETFVVLIPKVDVPERVTQFRPISLCNVVYKVITKAIVNRLKPILPHMISPTQGSFVPGRQITDNIIIVQEAIHTMRRKKGTTGFMAIKIDLEKAYDRLRWDFIRETLQEMQIPILLREVIMLCITTPTMRVLWNGEPSEVFQPSRGIRQGDPLSPYIFVMCMERLAHIIEEAVGTNLWKPIECSKGGPKLSNLFFADDVVLFAEATMEQAQIVRQCLDRFCQASGELVSYTKSRVFFSANVDELKATRISDCLQIEPTNDLGFYLGMPTIHGRTTKATYNHILEKMDAKLQGWKSKCLSLAGRITLTKSVLSSLSYYSMQT

Click here to download the sequence:
Link to NCBI Protein BLAST