Transcript Information: S_Transcript_46369.p1


Annotated TAIR IDAT3G32940.1
Annotated Gene NameRNA-binding KH domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:13491089-13493630 | Reverse length=607
E-Value1.7E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8914277543529
Replicate 26.6244508086177
Replicate 36.0537225312582
Condition 2: 8 Hour
Replicate 16.6472272617018
Replicate 27.0588021153336
Replicate 36.8883273430856
Condition 3: 24 Hour
Replicate 16.6701934322425
Replicate 25.9975481016288
Replicate 35.5514168983271


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46369.p1 GENE.S_Transcript_46369~~S_Transcript_46369.p1 ORF type:complete len:786 (+),score=200.28,SF1-HH|PF16275.1|6.7e-06,KH_1|PF00013.25|8.8e-06 S_Transcript_46369:237-2594(+)
ATGAGTGCCAAGTTTGACCAAGCATCGGTGATTGAGACACATCATGTGCGAGATTCTGTTGCAGCATCCTCTTCTGCATCATCACATGGTAGCTCAAAGGTGTCTATGTTCAAGGGAAAGCCAGGTTTTGTTATACCAAAAAACAAGTTCTCTGGCTCCTTAGTTCCCATCTTCAAAGCTGGTAAGAAGTCGGAAAGTAATGATGCCGCCAGCGAAGAAAATAGCAAACAGGTGCAAAGAAAAACAAAATGGGCCCCTGATCTTACACAGGATACTACTGTGAGGAGAGGAAGAGCTTTAGCTTATCAGACTCGAGTGGATCAAATCAGTCAACAGCTGAAATTGGGATCAGTGAGTGGCGAGAGTCAAAAATCAAGAATAGCTGGTGCTGGTGATCTTCCTGATAGTGAGCTTTCAACTATGCAGATTGATTATGAGAAGTTACAAGCTTTGGAACTTGAAAGAAGGGAAGCTATAGGGGAAATTCTGAAGTTGAATCCAAGTTACAAGGCCCCATCTGATTATCAACCAGTGACAAGGGAAGCTATCGTTTCTGTACCTATCAAGGAGCATCCTGGGTACAACTTTCTCAGTCTAATATATGGCCCTGATGGTGAGACCCGTAAAAGATTGGAAAAGGATACAGGGACTAAGATACAAGTTTATGGTACAAAATCGGAGACAGAAGAGAAGGTTGAAGTTACAGGATCTGATAGGAGTGAACTTCTAAGCTCTTGCAGTGAGATATATGTACGGATTTTGGGAGACACTTGTGATAAAGTTGATGCTGCAGCTGCTTTGATTGAATTACTACTTAACTCAGTATCGGGAAATTCTGTTGCCTCCAAGGCATCAGCTTCAGTGTCTGAAGATATTCCACAAGTTCTTGGTGAGGGTCAAGGTGTTGCTGCTGCCCCTGCAGTCAGCGCTGTTATTGCAAGCCAGGAACTGGTACGTCCAGTTATAGTACCTGCATCAAATTCTTCACAAGGCCCTCTTCAGCCATATCCAGGTTCATGGTTCCCAACAGGTCAGCCTAACATGCCTTCTGGACTTCCTTCTGCTCCTAGTTCTATGGCTTTCACCTTCAATCACTCAGCTGCGCATCCAGTATTTGGATTATCTTCACCTTCTCGACCTCCTGCTCCATATGGATTTGGCTCATCTCCACAAGGCATCCAAGTTGCACCGTCAAGGTTAAATCCACCAGTTCAAATGATGCAAGGCCCATTTGTGCCTCCTGCTTATCCCTTAGGGCAAACTGGTGCCCCCAGAAATCATTCTGCTTCTACGTCTCCTTCTCCCTTTGTAGGTCAGCAGCCAGCTGCAGCAGGTTCACCCAGGATTCCGGCACAACTAACTGAGCGGCCTTTGACGCCTACAGCGAGCTCTCCTGGATGGGCTCCACCTCGGCCTGCTGGTGTTCCACAATCTCTAGCTTCTGGCAGCATGGTTCCACCAATAGATGCATCACAAGGGGCTGTGGTATCACAATCTGTTTCTTCTTCATTAGGTCCACCGTCTGCACCATCAATCACTCAAGCGTTTCCTTCTCAAATTGCTCCGACTTCAGCAACATCATTCATGCCTTCACAAAGTCGGTCTTCCTCGTCAATGCTTATCCAGGCATTTGGAAAACATACACCACTGGTTAATTCATCGTCAAATGCCATACTGAGGCCAGCTCAAACACTTATGCCTCCTCATGTGCCACAATCAGGGATGCCAAGCCGTGCTGCTGGGACCTTGAATGCTCCAAGCTTCACCCCCCTTATGCCAATGGTTAGTGCAGCTCCAAGGGCACCTCTTCCGGGTTCCAGTGACTTCACTTTTCAGCCTCGCCGAGCACAAGGACCACCTCAGTCTGTCCCAGGACCTGGTGTGCACTTTATACAAAGACGTCCACCAGTGCAGTTGCCTCCAGCACCCCAAACAGCATCATTTTGTCCAGCTATGCAAAATACAGTTCCTCCTAATGTGGGGCAAAATTTTTCTAGGGCACAGATAGGCAACCAAATGGGTCCAAGCCCTGGTCAATTTGCACAGCCTGGTCAAAATCCCCAGATGGGCCCTAGAAGCCTTGGTCTAACTCCTCAAATGCCGAACACAGCTGGTCTTTTCCCACCCAGAGGAGGGCATTCAGCTCAATATCAGCAAAGCTACCCTCCACCACCCTTGGGCCGGCCAGGAGGCCTCTTTGTTGGAAATCAGCATTCCAGCCCATCTGGTAGACCGCAAGTGTATGATCCTTTTGCTCCAACTGCTGTAGCTGCTCAAGGAAGCAATCCCACAACCGTCCGAAAGCAGGAGTCTGATCCTGAATATGAGGATCTGATGGCATCAGTAGGGGTCAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46369.p1 GENE.S_Transcript_46369~~S_Transcript_46369.p1 ORF type:complete len:786 (+),score=200.28,SF1-HH|PF16275.1|6.7e-06,KH_1|PF00013.25|8.8e-06 S_Transcript_46369:237-2594(+)
MSAKFDQASVIETHHVRDSVAASSSASSHGSSKVSMFKGKPGFVIPKNKFSGSLVPIFKAGKKSESNDAASEENSKQVQRKTKWAPDLTQDTTVRRGRALAYQTRVDQISQQLKLGSVSGESQKSRIAGAGDLPDSELSTMQIDYEKLQALELERREAIGEILKLNPSYKAPSDYQPVTREAIVSVPIKEHPGYNFLSLIYGPDGETRKRLEKDTGTKIQVYGTKSETEEKVEVTGSDRSELLSSCSEIYVRILGDTCDKVDAAAALIELLLNSVSGNSVASKASASVSEDIPQVLGEGQGVAAAPAVSAVIASQELVRPVIVPASNSSQGPLQPYPGSWFPTGQPNMPSGLPSAPSSMAFTFNHSAAHPVFGLSSPSRPPAPYGFGSSPQGIQVAPSRLNPPVQMMQGPFVPPAYPLGQTGAPRNHSASTSPSPFVGQQPAAAGSPRIPAQLTERPLTPTASSPGWAPPRPAGVPQSLASGSMVPPIDASQGAVVSQSVSSSLGPPSAPSITQAFPSQIAPTSATSFMPSQSRSSSSMLIQAFGKHTPLVNSSSNAILRPAQTLMPPHVPQSGMPSRAAGTLNAPSFTPLMPMVSAAPRAPLPGSSDFTFQPRRAQGPPQSVPGPGVHFIQRRPPVQLPPAPQTASFCPAMQNTVPPNVGQNFSRAQIGNQMGPSPGQFAQPGQNPQMGPRSLGLTPQMPNTAGLFPPRGGHSAQYQQSYPPPPLGRPGGLFVGNQHSSPSGRPQVYDPFAPTAVAAQGSNPTTVRKQESDPEYEDLMASVGVK*

Click here to download the sequence:
Link to NCBI Protein BLAST