Transcript Information: S_Transcript_463882.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2672857731038
Replicate 20.67539151706678
Replicate 30.56457355357961
Condition 2: 8 Hour
Replicate 10.50774738850317
Replicate 21.2936102954944
Replicate 31.1600461281623
Condition 3: 24 Hour
Replicate 11.263139521565
Replicate 20.61670235581898
Replicate 30.68631413347255


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_463882.p1 GENE.S_Transcript_463882~~S_Transcript_463882.p1 ORF type:complete len:294 (+),score=35.30,RVT_1|PF00078.23|8e-06 S_Transcript_463882:3481-4362(+)
ATGGATATATGTTCCAGGATGCTGAGGAAACTTTTTGCTGACAGGGAGTTTAAAAGCCATCCTAATTGTAGCAGAGTAAAGCTAAATCATCTACTTTTTGCAGATGACTTAATGGTGTTTTGTAAAGGGGATGTAGCATCTGTGCTCAAGGTGAGAGCTTGCCTAGAGATTTTCTCCAGAATTTTAGGCTTATGCCCCAATCCTAACAAATCATGCATTTATGTTGGAGGAGTAAAAGTAGAGGCCAAGAAAAAACTTGTTGAACTAGCAGGCTATGTGGAGGGAAAATTCCCCTTCAGATATTTGGGTGTTCCACTAACTACTAAGAAAGTCACCTATCAGAAGTTCAAGCCATTATTGGACAAAATACGTGATCTGACACAGCAATGGTATAGCCAGTACCTTAGCTATGCAGGCAAAGTTCAGTTGCTCAATTCTGTTATTTTAGGGATGGAGAATTTTTGGTGCTCTGCCATTTACCTGCCCAATAATGTGATTCAGAAGATAGAGAGATTATGTAGGGACTTTCTCTGGGGGAAGATGATGCACTTCCTAAAATGGGAAGAGGTTTGTAAACCAAAAAGGGAAGGAGGTTGGGGACTGAAAGATATTAAAAGCTGGAACAAAGCACTCTTATTCAAATGGTTGTGTTATATTCAATATGGTAAGAGGTCCCTCTGGGTAGACTGGATCACTAAATACTACTTGAGGAAGCATACGCTATGGGACAGAGAGGTGAAGATAGGGGATTCTGCACAATGGAAGAGTTTGCTGAGAATAAGAGATGAGTATATAGTAAAAGGAGGTGATGTACAGCAGCTTGCAGGATGGTGCCAGGATAAGTATGATACAAGAGAAGGTTATGATCTGTTTCGAACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_463882.p1 GENE.S_Transcript_463882~~S_Transcript_463882.p1 ORF type:complete len:294 (+),score=35.30,RVT_1|PF00078.23|8e-06 S_Transcript_463882:3481-4362(+)
MDICSRMLRKLFADREFKSHPNCSRVKLNHLLFADDLMVFCKGDVASVLKVRACLEIFSRILGLCPNPNKSCIYVGGVKVEAKKKLVELAGYVEGKFPFRYLGVPLTTKKVTYQKFKPLLDKIRDLTQQWYSQYLSYAGKVQLLNSVILGMENFWCSAIYLPNNVIQKIERLCRDFLWGKMMHFLKWEEVCKPKREGGWGLKDIKSWNKALLFKWLCYIQYGKRSLWVDWITKYYLRKHTLWDREVKIGDSAQWKSLLRIRDEYIVKGGDVQQLAGWCQDKYDTREGYDLFRT*

Click here to download the sequence:
Link to NCBI Protein BLAST