Transcript Information: S_Transcript_46410.p1


Annotated TAIR IDAT2G17990.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: kinectin-related (TAIR:AT5G66250.3); Has 7578 Blast hits to 6129 proteins in 783 species: Archae - 220; Bacteria - 1045; Metazoa - 3605; Fungi - 575; Plants - 442; Viruses - 38; Other Eukaryotes - 1653 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7827480-7828596 | Forward length=338
E-Value1.4E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.19116832843
Replicate 220.24021128972
Replicate 319.886080646665
Condition 2: 8 Hour
Replicate 124.014243878859
Replicate 224.122688968053
Replicate 322.427978784372
Condition 3: 24 Hour
Replicate 116.71608475802
Replicate 216.061744725846
Replicate 316.997464707796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46410.p1 GENE.S_Transcript_46410~~S_Transcript_46410.p1 ORF type:5prime_partial len:460 (+),score=108.96 S_Transcript_46410:1-1380(+)
CAGGGAACAAAGCTAACATACACGGGACCAGCTTTTGCCAGCTTTCTTTCTTCCTTCTCTCTCTCTCCTGAAGAAAGGAGTAATTTCAATTTTGTATTGTGGGGGTTACCTTTACCAAATCTGCTCCTTGTTGAAAAACAAAGCCCCCCCCCCATCAAATATCATCATCAATTTTCTTCTTCTTCTTCTTTCATTTCATTTGTTATTTCTCTCTCCTCTTCTCTTTATCCGAGTCAATATATTTACAAACACCCCTTCTTGGCCGGCTTCGGAGCTCTTCAATCTCTCTCTCTCTCACATCGAAAGAAGTCCTGTGAGGTTGTTCTGTGGAACTGTGTAAAGGAAATGGCAGCAGAGGAACATGCTGACATATCAGCTTTGGGATCTCAGCTAGGTGAAAGAGATGCACAGTGGAAGAAGGAGATGGAACGGTGTGAATCTCAAGTGGATGCATTGCAGACGAAGTTTATGGAGGTGAAGGCCTCTATCGAAGGTTCGAAAGAGGAATCAGAAAAAGAATTAGATTCGTTATGGAAAAGAGTTAAAACTGCAGCTACCCTATTGACATATTTGAAAGCAAGAGCAAGAATCATGTCTGTTCCTCACTTGGCGCAAGCATCATGTGGGATAAAGCAACTGGAAGGAGTAGGGTTTGTTGACAAAGATGGAATTCCCTTGTCGAGTTGGTCGAAAGGTATTGATCTTTCTTTGTTTGATGGACTTGATGACGAGAGATGTATTGGACCTAGTGACCAGGATAGTCTCATTGACGGAAAAGGTGGAGCTTATGTTGGTGATCTACTCAACTCTGTACACATGATCACAAATGTGATGGAAGCTCTAGTTAAAAGGGCCATAATTGCAGAGTTTGAAACAACTATTGAGAAGGAAAAAGTAAACTTTAGTCAAGAAGAAATTAAGAAGAAGGAAAATCAGCTGGAAAGCATGTCCTTGAAGCTGGAGGAGATGGAAAGGTTTGCATTTGGAACCAATTGTATTCTAAATGAGATGCGTCAGCGAGTTGAAGATTTGGTTGAAGAGACATCTAGGCAGCGGCAGCGAGCTGCAGAAAATGAGCAGGAACTTACTCGTGTAAAGCGTGATTTTGAATCTTTGAAATCCTATGTCAGTAGTCTCATCAGTGTGAGAGAAACACTAATCTCATCTGAGAAGCAATTCCAAACTATTGAAAAGCTCTTTGAACGGCTTGTAGCTAAAACAAGCCAATTGGAAGGCGAGAAAATGCAAAAGGAGGCTGAAGTCCAGAAACTAATGGAGGAAAATGTGAGGTTGCATGCATTATTAGACAAGAAAGAAGCTCAGTTATTGGCTATGAATGAACAGTGCAAGGTGATGGCCCTGAATGCATCCAATATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46410.p1 GENE.S_Transcript_46410~~S_Transcript_46410.p1 ORF type:5prime_partial len:460 (+),score=108.96 S_Transcript_46410:1-1380(+)
QGTKLTYTGPAFASFLSSFSLSPEERSNFNFVLWGLPLPNLLLVEKQSPPPIKYHHQFSSSSSFISFVISLSSSLYPSQYIYKHPFLAGFGALQSLSLSHRKKSCEVVLWNCVKEMAAEEHADISALGSQLGERDAQWKKEMERCESQVDALQTKFMEVKASIEGSKEESEKELDSLWKRVKTAATLLTYLKARARIMSVPHLAQASCGIKQLEGVGFVDKDGIPLSSWSKGIDLSLFDGLDDERCIGPSDQDSLIDGKGGAYVGDLLNSVHMITNVMEALVKRAIIAEFETTIEKEKVNFSQEEIKKKENQLESMSLKLEEMERFAFGTNCILNEMRQRVEDLVEETSRQRQRAAENEQELTRVKRDFESLKSYVSSLISVRETLISSEKQFQTIEKLFERLVAKTSQLEGEKMQKEAEVQKLMEENVRLHALLDKKEAQLLAMNEQCKVMALNASNI*

Click here to download the sequence:
Link to NCBI Protein BLAST