Transcript Information: S_Transcript_4642.p1


Annotated TAIR IDAT5G23570.1
Annotated Gene NameXS domain-containing protein / XS zinc finger domain-containing protein-related
Annotated Gene Symbol(s)SGS3, ATSGS3
Annotation TypeOrtholog
Chromosome Positionchr5:7943621-7945874 | Forward length=625
E-Value4.1E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.038713059272
Replicate 231.160847107005
Replicate 326.301496476612
Condition 2: 8 Hour
Replicate 1152.06249109296
Replicate 2139.34355896737
Replicate 3148.7714312224
Condition 3: 24 Hour
Replicate 118.466808724007
Replicate 228.58288264096
Replicate 329.469055318692


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4642.p1 GENE.S_Transcript_4642~~S_Transcript_4642.p1 ORF type:complete len:582 (+),score=172.92,XS|PF03468.10|1.2e-34,XS|PF03468.10|2.5e+03,XS|PF03468.10|2.2e+03,zf-XS|PF03470.10|8.4e+03,zf-XS|PF03470.10|1.4e-10,zf-XS|PF03470.10|1.3e+04 S_Transcript_4642:226-1971(+)
ATGAGTTCGGGAAAGGCAGTTGATAAGTTGAGTCAGAGTGTTGGCAATATGAACTTGGAGTCCCCAGAGGAAGGCATTTGGGAATCGGTCAGTAGGAAACATAAGGGCAAAGCTGGAACACCATGGAGGCAGCAAACATCTGCACCTAAAGCATGGGGCCAGCCTGATACTGCGCAGAGGCTGGGGATGCGTGGCGGCAATGCTCCTGGGAGTGCCAGGAATAATCTAAGCACTGATTTAAGGAGACAAGGTAGCGGGGTCACGAGGCCGCAGCCAGAGGTGGCACCTCCAACGCAACATTGGAATCAGCAATTGAGAACATCTCAAGTGGAAGAGGAAGAAGTTGTGGACAAAGAAGAGGACAAGGCAGAGGAAGAAGAGGATGTGTACACTGATGATGAGGATGATGACCTGCTATCCGATGATTATGATTCAGATGACGGTCCACTGAGCCATGAGGATAAGAAAAAGCATAGGATGCTGAAGGCATTCTTTGACATATTAGACAAGTTAACAGCACAGGAAATCAATGAGCATGAAAGGCAGTGGCATTGCCCTGCATGCCAAGGTGGTCCTGGCGCAATTGATTGGTACAAGGGGCTCCAGCCTCTCATAACTCATGCAAAAACAAAGGGATCAAAAAGAGTGAAGCTCCACAGGGAGTTTGCTAACCTCCTGGATGAGGAACTCCAGAGAAGAGGAACATCTGTGGTGCCTTCTGGAGAATCCTTTGGGCAGTGGGAGGGCTTAAAGGAAAATAAAGATCATGACATTGTTTGGCCTCCCATGGTTGTTATCATGAACACAATACTTGAGAAGGATGATAATGACAAGTGGCTTGGCATGGGAAACGAGGAACTCATGGACTACTTCAGAGGATATGACGCAGTGAAGGCAAGACACTCCTATGGCCCGAAGGGCCACCGTGGCATAAGTGTCTTGATTTTCGAGAGCTCAGCCATGGGCTATGTGGAGGCTGAACGGCTGCACAAGCACTTCCTTGGACAGGGAACTGGAAGGAATGCATGGGAGAGCAAAGGGAGAACACTCTTTTATCCAGGAGGGAAGCAACAACTTTATGGTTTTCTTGCAAGAAAGGAAGATCTTGAGGAATTCAACAGGCATTCTCAAGGGAAAGCGAGACTGAAGTATGACATGAGGTCTTACCAAGAGACTGTTGTCACCCAGATGAAGCAGATCAGTGAAGACAATCAGCAACTGACTTGGTTCAAAAACAAGGTTGCCAAAGAACAACGGAACTCAAAAGCCCTGGAGGAGTCTTTAAGCATTGTCAGTCAGAAGCTTCGTAAAACAATGGAAGAAAATCGGATCGTAAGACAAAGAACCAAATTGCAGCATGAGCAGAACAAGGAAGAGATGGATTACCAAGAGCAATTCTTCAAGGAACAGATCAACAAGATCCATGAAAATACTGATGTGAAAGAGGATAACTTTGAGAAGCTTCAGCAGGAAGAACGAAAAAAGTTCGAGGGGGGCACCGCGGTTGCTTCAAACAAGGGGGATCATAGGCGCAGGGCTGAGGAGGTGAGCAAGTTTATACAGTTCCAAGAACAAGAGATGGAGAAGTTTGTTGCTGAGAGAGAGAGGCTCATAAAGGAGCACGAGGCGAAGAAGTTGGAGATGAAGAAGAGACACTGGGAGGAAGAGGTGGAGCTGGAGAGCGATTTCGATGCAACATTGACCAAGCTAATGGAGAAATATGCACCTCGGCAGGGAAGCCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4642.p1 GENE.S_Transcript_4642~~S_Transcript_4642.p1 ORF type:complete len:582 (+),score=172.92,XS|PF03468.10|1.2e-34,XS|PF03468.10|2.5e+03,XS|PF03468.10|2.2e+03,zf-XS|PF03470.10|8.4e+03,zf-XS|PF03470.10|1.4e-10,zf-XS|PF03470.10|1.3e+04 S_Transcript_4642:226-1971(+)
MSSGKAVDKLSQSVGNMNLESPEEGIWESVSRKHKGKAGTPWRQQTSAPKAWGQPDTAQRLGMRGGNAPGSARNNLSTDLRRQGSGVTRPQPEVAPPTQHWNQQLRTSQVEEEEVVDKEEDKAEEEEDVYTDDEDDDLLSDDYDSDDGPLSHEDKKKHRMLKAFFDILDKLTAQEINEHERQWHCPACQGGPGAIDWYKGLQPLITHAKTKGSKRVKLHREFANLLDEELQRRGTSVVPSGESFGQWEGLKENKDHDIVWPPMVVIMNTILEKDDNDKWLGMGNEELMDYFRGYDAVKARHSYGPKGHRGISVLIFESSAMGYVEAERLHKHFLGQGTGRNAWESKGRTLFYPGGKQQLYGFLARKEDLEEFNRHSQGKARLKYDMRSYQETVVTQMKQISEDNQQLTWFKNKVAKEQRNSKALEESLSIVSQKLRKTMEENRIVRQRTKLQHEQNKEEMDYQEQFFKEQINKIHENTDVKEDNFEKLQQEERKKFEGGTAVASNKGDHRRRAEEVSKFIQFQEQEMEKFVAERERLIKEHEAKKLEMKKRHWEEEVELESDFDATLTKLMEKYAPRQGSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST