Transcript Information: S_Transcript_46490.p2


Annotated TAIR IDAT5G39570.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15844021-15845827 | Forward length=381
E-Value5E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 172.465704662028
Replicate 261.221853274316
Replicate 362.43385115747
Condition 2: 8 Hour
Replicate 199.33385273262
Replicate 289.681090218125
Replicate 394.860135661995
Condition 3: 24 Hour
Replicate 180.854438893758
Replicate 276.625267710508
Replicate 372.608915711698


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46490.p2 GENE.S_Transcript_46490~~S_Transcript_46490.p2 ORF type:5prime_partial len:231 (+),score=81.69 S_Transcript_46490:3-695(+)
CATCAGCATGAGAATCTCAGCTCTGAATATGGATCTGGGTATGGAAGGCAAAGTGAGTATGAGAATCCTAGCTCTGAATATGGATCTGGGTATGGAAGTAAAAGTGAGTATCAGGATGCTAGCTCTGAATTTGGATCTGGGTATGGCAGGAATAATGAGTATGAGGATGCTAGTTCTGGATATGGATCTGGTTATGGCAGAAAGAATGAGTCTTCTGAGTATGGATCTGGGTATGGCAGGAAACCTGAATATGAGGCACCTAGCTCTGAATATGGATCTGGGTATGGTAGAAAGAATGAGTCTTTTGAGTATGAAACTGGGTATGGCAGGAAACCTGAGTATGAGGCACCTAGCTCTGACTATGGGTCTGGATATGGGAGAAGGACGGAGTATGAGAACCCGACCTCGGAATATGGATCATCTGGGTATGGGAGGAGGACTGAGTATGAGAATCCAACATCTGAATATGGGTCTGGATATGGGAGGAGGACTGAGTATGAGGAGCCTAGTGCTGGTGGATATGGTGGGGCTTCTTATGGAAGGACTGGCTATGGTGGGAATGATGATGATGATGATAAGCCTCGTTATGGTGATGAGGGCTACGGCCGCAAGAAATATGGTGGTGATGATTCTGATGACGATGAGAAGAAGTGCTATCACCACAGGCACCACCACAAGCACTATGATGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46490.p2 GENE.S_Transcript_46490~~S_Transcript_46490.p2 ORF type:5prime_partial len:231 (+),score=81.69 S_Transcript_46490:3-695(+)
HQHENLSSEYGSGYGRQSEYENPSSEYGSGYGSKSEYQDASSEFGSGYGRNNEYEDASSGYGSGYGRKNESSEYGSGYGRKPEYEAPSSEYGSGYGRKNESFEYETGYGRKPEYEAPSSDYGSGYGRRTEYENPTSEYGSSGYGRRTEYENPTSEYGSGYGRRTEYEEPSAGGYGGASYGRTGYGGNDDDDDKPRYGDEGYGRKKYGGDDSDDDEKKCYHHRHHHKHYDD*

Click here to download the sequence:
Link to NCBI Protein BLAST