Transcript Information: S_Transcript_465280.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.45492309803727
Replicate 20.37714170183786
Replicate 30
Condition 2: 8 Hour
Replicate 10.54680487992649
Replicate 20.19121238153612
Replicate 30.18218673166651
Condition 3: 24 Hour
Replicate 10.37341681180503
Replicate 20.38741558250167
Replicate 30.21557302910356


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_465280.p1 GENE.S_Transcript_465280~~S_Transcript_465280.p1 ORF type:internal len:117 (+),score=12.81,zf-RVT|PF13966.2|5.3e-10,zf-RVT|PF13966.2|8.1e+03 S_Transcript_465280:3-350(+)
AAGGTGATGGCTTTTGTTTGGACCTTGGCTTTGGGGAAGATTAACACTAATGATTTGCTGCAACGTCGGCGGCCTCTTTGGTGTCTCTCCACTCATATGTGTTTCATGTGTTGCACGAGTGGTGAGACGGTCTCTCATCTGTTTCTTCATTGTCCCGTTGCATGGTCATTGTGGGCTTTTCTCTTTGGGGTGCGTGGGGAAGCTCTAGTATGTCCTTCTACTGTTTTGGATTTCCTCCAGATCCACTTCTTGGGGTTTGGTAGGGATAAGGAGTTGGGTGTCTTGTGGCGGAATGCGGTGTTGGCTACCCTGTGGTGCGTTTGGTTGGAGCGGAATGCTAGGGTGTTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_465280.p1 GENE.S_Transcript_465280~~S_Transcript_465280.p1 ORF type:internal len:117 (+),score=12.81,zf-RVT|PF13966.2|5.3e-10,zf-RVT|PF13966.2|8.1e+03 S_Transcript_465280:3-350(+)
KVMAFVWTLALGKINTNDLLQRRRPLWCLSTHMCFMCCTSGETVSHLFLHCPVAWSLWAFLFGVRGEALVCPSTVLDFLQIHFLGFGRDKELGVLWRNAVLATLWCVWLERNARVF

Click here to download the sequence:
Link to NCBI Protein BLAST