Transcript Information: S_Transcript_46531.p1


Annotated TAIR IDAT1G31480.1
Annotated Gene Nameshoot gravitropism 2 (SGR2)
Annotated Gene Symbol(s)SGR2
Annotation TypeOrtholog
Chromosome Positionchr1:11266225-11271527 | Forward length=933
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3006680407069
Replicate 28.0622823124252
Replicate 38.3622343733096
Condition 2: 8 Hour
Replicate 110.464011397848
Replicate 210.676420520615
Replicate 39.2677598282528
Condition 3: 24 Hour
Replicate 19.6560716878713
Replicate 29.1969090454743
Replicate 38.3812383582218


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46531.p1 GENE.S_Transcript_46531~~S_Transcript_46531.p1 ORF type:complete len:966 (+),score=226.65,DDHD|PF02862.13|1.6e+04,DDHD|PF02862.13|3.4e-43 S_Transcript_46531:424-3321(+)
ATGGGCACTGATGGAAATGCTAGAAGTAGCCAATATGAAGCTCATTTATCACTTTCAGAGCATGGTGTTGATGATGGGTGTTCTAGAGATGGTGAAGATCCTGATTTGTTGAAGAACACACCTTCAAATATCAGAAGATTGGCTGATGAGATTGAGCAATGTGAGGGTAGACAAAAGTATCTTGCTCAAACTAGGAGCCCTTCTGATGGTGGTGATGTTAGGTGGTACTTTTGTAAAGTCCCTTTGAGAGTTAATGAGTTGGCAGCATCTATTCCCCATGGTGAGATTGTTGGTAAAGGAGAATATTTTCGGTTTGGTATGAGGGATTCTCTTGCAATAGAGGCATCTTTCCTACAGAGAGAGGAAGAATTGCTATCTTATTGGTGGAAGGAGTATGCAGAATGCAGTGAAGGTCCTAAAGGACGGACTAGTTCAACCACTGAGGCAGACTTATCTCAATCTGAGCTTTATACAGTTGAGGAGGAAAGAGTTGGCGTTCCTGTCAAGGGTGGCCTCTATGAGGTAGACTTGGTGAAAAGACACTCCTTTCCAGTGTACTGGAATGGGGAAAATCGGCGTGTTTTAAGAGGCCATTGGTTTGCACAAAGCAGCGGCCTTGATTGGCTTCCCCTTCGTGAAGATGTGGCTGAACAATTGGAGTTTGCATATCGTAGGCAGGTTTGGCATCGAAGGACATTTCAACCATCTGGGCTCTTTGCAGCTCGAGTTGATTTACAAGGCTCTACATTGGGACTGCATGCGCTCTTCACTGGAGAGGATGACACATGGGAGGCATGGCTAAAAGTCGATGCATCTGGCTTCTCCAGTGTCATCAACATAGGAGGAAGTGGCGTGAAACTGAGAAGAGGATATGCTGCGTCACCATCCCCCAAACCAACCCAGGATGAATTACGTCAGCAAAAAGAGGAGGAAATGGATGATTATTGTTCGCAGGTCCCTGTCCGGCATTTGGTTTTTATGGTCCATGGAATTGGTCAGAGATTGGAGAAATCTAATCTGGTTGATGATGTGACAAATTTTCGCCATATTACCTTGAGTCTGGCTGAAAGGCACCTGACTTCATATCAACTTGACACCCAGAGAGTTCTTTTCATTCCATGTCAGTGGAGAAAGGGCTTGAAGCTCAGTGGAGAATCTGCAGTGGAGAAAATCACTTTAGATGGTGTCCGAGGCTTACGTACTATGTTGAGTGCAACTGTTCATGATGTTTTGTACTACATGAGCCCCATCTACTGTCAGGATATCATTGACTCGGTTTCAAACCAGCTGAATCGTTTGTATCTGAAGTTTCTGAAGCGAAATCCGGGGTATGATGGAAAGGTTTCATTATATGGTCATTCTCTGGGTAGTGTTCTCTCATATGATATTCTCTGCCACCAAGAGAATCTTTCCTCTCCATTTCCAATGGATTGGATGTACAGAGAACATGAAAGAGAAGATGAATCATCAAGGGAAATCTCCAAGTTATCTTCTGAATACAACTCCAAGGCTGATGGAACTGAACCCTCAAAGGAAGCTTATAATGAGGAGAAACTGGGAAGACTACATGTTCCATCAAATCTTGAGAATGATCCTATTAAAGATCCTCTGCCAGCGGTGGATGATTGTTCCTCTTACTCATCTTTTAGAAAAGAAAATTTCATTAAGGAGGGGGATAGTGAAATGCAGGCTGACACAACTTTGTCAAGAACAGATGATGAGCTTGACAATCCTAGCCATGTATGTACTGTAGGATTGGAAATTGTGGGTGAAGTTGGTGGTAATAATCTTGAAACCAAGCACTGCTTGAAGGAGACATATAATTTGGGTGGTGTCACAAAGCCTGGCGTTTCAACACATGAGACCCAAGATCAATATTCCACAAATATGAAAGATAAAGACAAATGTATCACAGATCTCGAGTCAGAGGTTGACACTCTAAAAGCACGAGTGGCAGAACTGGAAGCACAGGTTGGCAGGGATGATAGTACTAGTAGGTCCGACAGAGTTAATCACGGGGAGCATCCAATCAGTTTAGATCAAGATGAACTCAGAAAGAATCAAGCAGGAGATGATGATTCTCCCAAGAGTTATAAACCTGTTATCAATTACACAAAGCTGGAATTCAAGGTTGATACATTCTTTGCTGTTGGGTCCCCTCTTGGTGTCTTCCTTGCATTGCGCAATGTTCGCATTGGGATTGGTGAAGGGCGGGACTACTGGGAAGAAGAGAACATTGTTGAAGAGATGCCTGCTTGTCAGCGGATGTTCAACATCTTTCATCCTTTTGATCCTGTGGCATATAGAGTAGAACCGCTTGTATGTAAAGAATACCTTGGGAAACGCCCTGTTATTATTCCTTACCACAAAGGAGGCAAACGATTGCACATTGGACTTCAGGAGTTTAAGGAAGATTTAGCTGCACGGTCTCAGTCGGTTATGGACCATCTAAGCTCTGTTAGGGTCAAAGTGCTCACAATTTGTCAATCACGAAAGAGTGAGAGCCTTGAAGAAACAATTGAAAATTTCAATGAAGAAGCTAGATCATATGGTTCATTTATGATGGAGAGATTAACTGGAAGTGAAGATGGACGAATTGATCATGTTCTTCAAGATAAAACATTTCGGCATCCGTATATATCAGCTATTGGATCACACACAAACTACTGGAGGGACTATGATACCGCTCTGTTCATACTAAAGCACCTGTACCAAGAAATTCCCGAGGGACCTCATCAGCGGAACTTCAGTACCAACAGATCAAAACATAGCATCTTGAGTGGTTGGTCAGAACGTAAGGAACTTGCTGAAGAAGAAGTTCCATTGACATTTTCTGATCCTAGTCTGATGGGAAGATACTCCAACAAATCAATCAAAGTTGTCAAGACATCCAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46531.p1 GENE.S_Transcript_46531~~S_Transcript_46531.p1 ORF type:complete len:966 (+),score=226.65,DDHD|PF02862.13|1.6e+04,DDHD|PF02862.13|3.4e-43 S_Transcript_46531:424-3321(+)
MGTDGNARSSQYEAHLSLSEHGVDDGCSRDGEDPDLLKNTPSNIRRLADEIEQCEGRQKYLAQTRSPSDGGDVRWYFCKVPLRVNELAASIPHGEIVGKGEYFRFGMRDSLAIEASFLQREEELLSYWWKEYAECSEGPKGRTSSTTEADLSQSELYTVEEERVGVPVKGGLYEVDLVKRHSFPVYWNGENRRVLRGHWFAQSSGLDWLPLREDVAEQLEFAYRRQVWHRRTFQPSGLFAARVDLQGSTLGLHALFTGEDDTWEAWLKVDASGFSSVINIGGSGVKLRRGYAASPSPKPTQDELRQQKEEEMDDYCSQVPVRHLVFMVHGIGQRLEKSNLVDDVTNFRHITLSLAERHLTSYQLDTQRVLFIPCQWRKGLKLSGESAVEKITLDGVRGLRTMLSATVHDVLYYMSPIYCQDIIDSVSNQLNRLYLKFLKRNPGYDGKVSLYGHSLGSVLSYDILCHQENLSSPFPMDWMYREHEREDESSREISKLSSEYNSKADGTEPSKEAYNEEKLGRLHVPSNLENDPIKDPLPAVDDCSSYSSFRKENFIKEGDSEMQADTTLSRTDDELDNPSHVCTVGLEIVGEVGGNNLETKHCLKETYNLGGVTKPGVSTHETQDQYSTNMKDKDKCITDLESEVDTLKARVAELEAQVGRDDSTSRSDRVNHGEHPISLDQDELRKNQAGDDDSPKSYKPVINYTKLEFKVDTFFAVGSPLGVFLALRNVRIGIGEGRDYWEEENIVEEMPACQRMFNIFHPFDPVAYRVEPLVCKEYLGKRPVIIPYHKGGKRLHIGLQEFKEDLAARSQSVMDHLSSVRVKVLTICQSRKSESLEETIENFNEEARSYGSFMMERLTGSEDGRIDHVLQDKTFRHPYISAIGSHTNYWRDYDTALFILKHLYQEIPEGPHQRNFSTNRSKHSILSGWSERKELAEEEVPLTFSDPSLMGRYSNKSIKVVKTSR*

Click here to download the sequence:
Link to NCBI Protein BLAST