Transcript Information: S_Transcript_46541.p1


Annotated TAIR IDAT5G37360.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14805437-14808113 | Reverse length=309
E-Value9.8E-116
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.909088957673
Replicate 232.664389734502
Replicate 332.155030119784
Condition 2: 8 Hour
Replicate 120.425292673877
Replicate 223.170843234003
Replicate 322.907615445613
Condition 3: 24 Hour
Replicate 130.497726951154
Replicate 227.446758824603
Replicate 328.743303851285


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46541.p1 GENE.S_Transcript_46541~~S_Transcript_46541.p1 ORF type:complete len:308 (+),score=67.96,DUF3082|PF11282.4|8.8e-06 S_Transcript_46541:235-1158(+)
ATGTCTGTTACACTTTCTCATCGTCTTCTCCATCTTCATCTTCAACTTTCACCCCATTTTTCTCCTAAAAATTCACTACTTTTTAACAGACATTCACAAACCCACATCAAAAGAACACTCAAGCCCAATACCCATGTCGTCAAAAGACCCCTCACTGTCTCGTTTGCCCTTGCTGAATCAGACTCCCCCAAGTCCTTAAACCCTGACCCTCAAACCCTTCTTCAAGAATTAGCGGATAGTTTGGATTTGCCTTCTGATTATTTCTCTAAGTTCCCTAGGGACCTCCGTCTTGATCTCAATGATGCTGCATTTGACCTCTCCAATGGACCTGTACTTGATGAGTGTGGTCAAGAGCTGGGGGAGACATTATTGAATCTAGCTCGTGCTTGGGAATCAGCCGATACTTCAACTTCTTCTGCTTTGGCAAAGAACCTCCCCAAGTTGGGAATGTCATTGACAGACAGTGCAAAGTCAGCTTTTGGTAAGCGATTGGTGTCTGCTGGAAGACGATTTCAAGCAATGGGACAATATGGCCAAGGTGAATTAGAAACGATTGCAAAATCAATGACCAATGCCGGGAAGCTTCTCTCTACAAGTGTTGTGGAAGGAGCAACTGAGGAACGCCCCAAAAGTGAAGTGAGGACTCTGAAGTTTGGAGACCTTCAGGTTGAACTGACCCCAGAAAAGGCCAATATTGGTGCAGTTATTGCTGTTGTTTTTGGGATCTTGTTATGGGTGATAAGTCAAGGAATTCAAGGTATCCCCGAGAGTTCATTGCAATATTCAAACGACAATTCTCTGTTTGTGGCAAAGTCTTTGAGGGGATTTCTTCTTGCACTGTTCTATTCATCAACCGTTTTGTCTGGCATCTCCGCTATTGGGCTTGTCTTGCTTGCACAGCAGCTGAAGTCAAAGGAAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46541.p1 GENE.S_Transcript_46541~~S_Transcript_46541.p1 ORF type:complete len:308 (+),score=67.96,DUF3082|PF11282.4|8.8e-06 S_Transcript_46541:235-1158(+)
MSVTLSHRLLHLHLQLSPHFSPKNSLLFNRHSQTHIKRTLKPNTHVVKRPLTVSFALAESDSPKSLNPDPQTLLQELADSLDLPSDYFSKFPRDLRLDLNDAAFDLSNGPVLDECGQELGETLLNLARAWESADTSTSSALAKNLPKLGMSLTDSAKSAFGKRLVSAGRRFQAMGQYGQGELETIAKSMTNAGKLLSTSVVEGATEERPKSEVRTLKFGDLQVELTPEKANIGAVIAVVFGILLWVISQGIQGIPESSLQYSNDNSLFVAKSLRGFLLALFYSSTVLSGISAIGLVLLAQQLKSKEK*

Click here to download the sequence:
Link to NCBI Protein BLAST