Transcript Information: S_Transcript_46543.p2


Annotated TAIR IDAT5G37360.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:14805437-14808113 | Reverse length=309
E-Value9E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.181525936679
Replicate 213.973100053093
Replicate 314.600499399517
Condition 2: 8 Hour
Replicate 111.195829916495
Replicate 27.6437149519066
Replicate 310.480291739116
Condition 3: 24 Hour
Replicate 115.837540530681
Replicate 218.319914357547
Replicate 317.235063676829


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46543.p2 GENE.S_Transcript_46543~~S_Transcript_46543.p2 ORF type:complete len:120 (+),score=31.96,DUF3082|PF11282.4|3.9e-08 S_Transcript_46543:1027-1386(+)
ATGACCAATGCCGGGAAGCTTCTCTCTACAAGTGCTGTGCAAGGAGCAACTGAAGAATGCCCCAAAAGTAAAATGAGGACTCTGAAGTTTGGAGACCTTCAGGTTGAACTGACCCCAGAAAAGGCCAATATTGGTGCAGTTATTGCTGTTGTTTTTGGGATCTTGTTATGGGTGATAAGTCAAGGAATTCAAGGTATCCCCGAGAGTTCATTGCAATATTCAAACGACAATGCTCTGGCTGTGGCAAAGTCTTTGAGGGGATTTCTTCTTGCACTGTTCTATTCATCAACCGTTTTGTCTGGCTTCTCCGCAATTGGGCTTGTCTTGCTTGCACAACAGCTGAAGTCAAAGGAAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46543.p2 GENE.S_Transcript_46543~~S_Transcript_46543.p2 ORF type:complete len:120 (+),score=31.96,DUF3082|PF11282.4|3.9e-08 S_Transcript_46543:1027-1386(+)
MTNAGKLLSTSAVQGATEECPKSKMRTLKFGDLQVELTPEKANIGAVIAVVFGILLWVISQGIQGIPESSLQYSNDNALAVAKSLRGFLLALFYSSTVLSGFSAIGLVLLAQQLKSKEK*

Click here to download the sequence:
Link to NCBI Protein BLAST