Transcript Information: S_Transcript_465621.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24789651188219
Replicate 30
Condition 2: 8 Hour
Replicate 10.2396111271588
Replicate 20.25136908583962
Replicate 30.23950390567395
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_465621.p1 GENE.S_Transcript_465621~~S_Transcript_465621.p1 ORF type:5prime_partial len:178 (+),score=21.23,zf-RVT|PF13966.2|2.5e-13 S_Transcript_465621:1-534(+)
AGGGAAATTATAAAGGAGGTGCAAGAAGGCTATAAGGAAAAGAAGGGAATGAAGAAATTGTACGTACAACTAAGAGGAGAGTTCCCAAAGGTCAGTTGGTGTAATGTCATATGTCAAAACTTTGCTAGGCCTAAAGTTGTATTGTCTCTTTGGATTTTTATGTTACATAGACATGCTACAATTGACAGAATGGAAAGATGGGGAATAGTTGGAGACAGACAATGTTACCTATGCAAAAGGACGATGGAAGGTCACACTCACCTCATGTTTGAATTCCCCTTCACTTTGAAGGTGTGGCAGGAAACTCTGGACAAGTTCAGACTAGTTAAAGATGGTGAGGTGCAGGCCAGAACCTGGCATGAGAGAAGTCAATGGCTCATAGACAGGAGTATAGAAAAATCAGGTAAAAAGGGTTTGTTTAAAATGATCAGTGCTGAGGTATGGTACACAATTTGGTGTGGAAGAAACAAGAGAATTTTTGAGCAAATTGAACAACCTCCTAGCAGTTTGAGTAGGCAGGTGATATATAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_465621.p1 GENE.S_Transcript_465621~~S_Transcript_465621.p1 ORF type:5prime_partial len:178 (+),score=21.23,zf-RVT|PF13966.2|2.5e-13 S_Transcript_465621:1-534(+)
REIIKEVQEGYKEKKGMKKLYVQLRGEFPKVSWCNVICQNFARPKVVLSLWIFMLHRHATIDRMERWGIVGDRQCYLCKRTMEGHTHLMFEFPFTLKVWQETLDKFRLVKDGEVQARTWHERSQWLIDRSIEKSGKKGLFKMISAEVWYTIWCGRNKRIFEQIEQPPSSLSRQVIYN*

Click here to download the sequence:
Link to NCBI Protein BLAST