Transcript Information: S_Transcript_46568.p1


Annotated TAIR IDAT3G19950.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6942853-6943839 | Forward length=328
E-Value2E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4189696537971
Replicate 26.9968948980354
Replicate 36.8865459544902
Condition 2: 8 Hour
Replicate 17.0902832256452
Replicate 26.9804745116283
Replicate 34.9064610855456
Condition 3: 24 Hour
Replicate 18.7714749565813
Replicate 27.419355196349
Replicate 36.0636116984167


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46568.p1 GENE.S_Transcript_46568~~S_Transcript_46568.p1 ORF type:complete len:391 (+),score=37.42,zinc_ribbon_9|PF14369.2|1.5e-13,zinc_ribbon_9|PF14369.2|3.9e+03,zf-RING_2|PF13639.2|4.5,zf-RING_2|PF13639.2|5.2e-12,zf-RING_11|PF17123.1|5.7e-08 S_Transcript_46568:260-1432(+)
ATGTCCTCAGCCGGTGGAGATAGCGGTGGCGGCGGCGGCGGAACCAATAATCAACCCTCCTCAGCAACCGCAACGACGTCGTCATCACCACAATACTACTTTTGTTACGAATGCAATCGAACCATATCTCTAACCCCGACCCCAACCACGGAACTTCTTTGCCCATCTTGCAACGGTGGCTTCCTCGAAGAAGTCGAAAACCCTAACCCTAACCCTACCAGTCCTTCCCCTTTTCCTTTCTCTTCTTCATCCGATCCTTTCTTCCCCTTCCACTCCTCGCCTGACTCTCTCGATCTCTCCTCCATCTTAGGCCCAGCCCACCACGGCCCACGATCCTCCTCCCCCTTCCCTTTCCAAGATCCCGACGTCTTCAATCCCTTCCACTTCCTCCAGAACTACCTCCAGACCATGCGAGCCGGTGGGGCCAACATCCAATTCGTCATCGAGAACGCCTCCCCCGACCAAGCCGGTGGGCCCGGTTCCAGCCCGTTTCGTTTGCCGTCCAATCTAGGGGGCTACATTTTTGGGCCGGGGTTGGAGCAGTTGATCCAGCAACTCGCTGAGAATGATCCTAATAGGTACGGTACCCCGCCCGCCTCGAAATCGGCCGTTGAGGGTTTGCCGAGTATTAGTGTTACCAAGGAGTTGCTGGATTCTGACTCTTCTCGATGTGCGGTCTGTATTGATGAGTTCCAATTAGGTGCTGTTGCCAAGCAGATGCCTTGTAAACATGTTTATCATCCTGATTGTATCTTGCCTTGGCTGGAGTTGCATAATTCCTGCCCCGTTTGCCGGTACGAGTTGCCCACCGATGATCCTGATTACGAGCACCGCTCTCGTGGTGGTCCCAATAATAACAATAGTAATAATAGTAGTTGGGTTGATGAATCTGGACAAGGACAAGGACAACAAGGACTAGGAGGACTATCGAGTGACGTTGGTGGTGGAGGGTCAACATCGTTGTTGCAAGAGAGTAATACGTTGCCAAGTGACCGGACCGTAGAGAGGAGGTTTAGGATCTCCTTGCCATGGCCGTTCCAAGGGGCGGCTGCAGAGACTAGTAATAGTTCTGGAGAGGGGAATGCTGGTGGCGGTGGTAGTGGTGAATCGAACTCGCGTGGGAGGGAGAATCAAGAGTTTGGGTCAGAGACTAGACAAGAAGAGCTCGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46568.p1 GENE.S_Transcript_46568~~S_Transcript_46568.p1 ORF type:complete len:391 (+),score=37.42,zinc_ribbon_9|PF14369.2|1.5e-13,zinc_ribbon_9|PF14369.2|3.9e+03,zf-RING_2|PF13639.2|4.5,zf-RING_2|PF13639.2|5.2e-12,zf-RING_11|PF17123.1|5.7e-08 S_Transcript_46568:260-1432(+)
MSSAGGDSGGGGGGTNNQPSSATATTSSSPQYYFCYECNRTISLTPTPTTELLCPSCNGGFLEEVENPNPNPTSPSPFPFSSSSDPFFPFHSSPDSLDLSSILGPAHHGPRSSSPFPFQDPDVFNPFHFLQNYLQTMRAGGANIQFVIENASPDQAGGPGSSPFRLPSNLGGYIFGPGLEQLIQQLAENDPNRYGTPPASKSAVEGLPSISVTKELLDSDSSRCAVCIDEFQLGAVAKQMPCKHVYHPDCILPWLELHNSCPVCRYELPTDDPDYEHRSRGGPNNNNSNNSSWVDESGQGQGQQGLGGLSSDVGGGGSTSLLQESNTLPSDRTVERRFRISLPWPFQGAAAETSNSSGEGNAGGGGSGESNSRGRENQEFGSETRQEELD*

Click here to download the sequence:
Link to NCBI Protein BLAST