Transcript Information: S_Transcript_46605.p1


Annotated TAIR IDAT5G45290.2
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18350011-18352092 | Reverse length=546
E-Value4E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.100493666703
Replicate 247.172925738996
Replicate 345.274709391233
Condition 2: 8 Hour
Replicate 164.486723574093
Replicate 265.343926229478
Replicate 356.685237461497
Condition 3: 24 Hour
Replicate 158.454172581645
Replicate 247.24757772454
Replicate 356.993459456864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46605.p1 GENE.S_Transcript_46605~~S_Transcript_46605.p1 ORF type:5prime_partial len:543 (+),score=126.08,zf-RING_2|PF13639.2|7.8e-14,zf-RING_11|PF17123.1|2.4e-09,zf-rbx1|PF12678.3|9e-09,zf-C3HC4|PF00097.21|6.6e+03,zf-C3HC4|PF00097.21|7.3e-06,zf-RING_5|PF14634.2|2.6e-05 S_Transcript_46605:3-1631(+)
AATAATAACAAAGTCAACCGCACCAAACAAAGGCTTGCTTCTTTTATATGTGGCGCTTCTTCTTCTTCTTCTTCTTCTTCAAGTTCTTCTCGTAATCAGACAGAAGATTGTGCAGCTGAATCTCCAGTGGGTTCGGTGGAGTACTGTCAACAAGTAGCTGATAAGTTGCCAATAACTACAAATGAGTCTATTTTGATCTCCAATGAAGGTTCTGAGTTTACCAGCAGGTCCAGCCCTAGGTCTGAACCTGGAGCTTCATCAGAGAGCAGTACTACAAGTAGTGAGCATGTTTTCATCGAACGTGAATCATCTAGTAAGAGGAAATGGTTTTCTGAAAGTGATGAAGTAGTTCCTTCCCCTCCATCCAATGGTGAAAGTAAGTGTTATCAGCAAACAATGGATGATAGTGTTAGTGCTCCTTGTACAGGGCAAATACGGCCAGTAAGTGTCAATCCCAACAGACTTGCAGGCAATGATGTCGATGACTTAGTGAACATCGATATGCCTCAGACTAGTCAAGAAGCCATATCTCCAATTTCAAGCAGTGTACAGCACGAAGATATAGAACAACTGCCTACAATTTTAGACGAAATTAATCAAACTATGGGAAGTCACAATTCATATTCTGGTCCAGTCCCAGTTGCACCTGAATGTGCCATAGATTCTCAATCAAATGCTAACGAGTCCAGTCAGGACGAGATGCCTCCAGGGTTAGGGCTCTTTGTATCTGACAGGGTCCAAGCTCGGCCAGATGGAAGTGTGCTTCATGTTGATGTGGTGAGTATTTCTTCCAATATCTTGCCTAACAGCAACAATGAAATAAGCACCCGGGAAGCAAGAAGAAACAATAGACGAATGTTCTGGGATGCTTTTTCAAGTCGCAGTTCGAGAAGGCAAGCTGATTTTCCGGCCATACTTTTTACAACTGAAGATGCTGATCTTATGGGATCTCGTCGCAGATGGCTTCTTGATATTGGTGATGATTTCTTTGATGATGGGTTTGGTGGAGATTCTTGGAACTTTGGCAGGAGAAGTCGTGCTACTAGTGAACGCCGTCGGAACTCTAGATCTGAGTTCTGGGATAGACTCCGAGGTTCTGCTAGTGAGAGTAGTCATCGTTCTAGCTGTCCCTTTGACTTGCACCCTGATGGTTCATGTTCATGTGAGTTAGACGAAGAGACCAGTGCCCTTACAAGTATATCTCGTATTGTTCTGCTTGCAGAAGCTTTATTTGAGGTTTTGGATGAAATTCACCGCCAGCCAGACTCATTTTCACTGTCTATGCTTTCTGTTCCTGCTCCTGAGTCAGTTGTGGATTCACTTCCTCTTAAGATCTATGAGAAACCTAATAGAGCTGATTGTGAAGATGAAAAACTTAATACAGCCAATCATGGAGATGAAAAGCCTAATGCAGCTGATTCTAATGATGATGTGGACCAGTGCTATATATGTCTAGTGGAGTATGAAGAAGGTGATAAAATACGAGTTCTTCCTTGTCACCATGTCTATCACATGTCATGTGTTGATAAATGGCTGAAAGAAGTCCATGGCATATGTCCACTTTGTCGTGGAGATGTTCGAGGAGGGGTCAGAGAGGGCACTGCATCCAGCTCAAACGCAGATACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46605.p1 GENE.S_Transcript_46605~~S_Transcript_46605.p1 ORF type:5prime_partial len:543 (+),score=126.08,zf-RING_2|PF13639.2|7.8e-14,zf-RING_11|PF17123.1|2.4e-09,zf-rbx1|PF12678.3|9e-09,zf-C3HC4|PF00097.21|6.6e+03,zf-C3HC4|PF00097.21|7.3e-06,zf-RING_5|PF14634.2|2.6e-05 S_Transcript_46605:3-1631(+)
NNNKVNRTKQRLASFICGASSSSSSSSSSSRNQTEDCAAESPVGSVEYCQQVADKLPITTNESILISNEGSEFTSRSSPRSEPGASSESSTTSSEHVFIERESSSKRKWFSESDEVVPSPPSNGESKCYQQTMDDSVSAPCTGQIRPVSVNPNRLAGNDVDDLVNIDMPQTSQEAISPISSSVQHEDIEQLPTILDEINQTMGSHNSYSGPVPVAPECAIDSQSNANESSQDEMPPGLGLFVSDRVQARPDGSVLHVDVVSISSNILPNSNNEISTREARRNNRRMFWDAFSSRSSRRQADFPAILFTTEDADLMGSRRRWLLDIGDDFFDDGFGGDSWNFGRRSRATSERRRNSRSEFWDRLRGSASESSHRSSCPFDLHPDGSCSCELDEETSALTSISRIVLLAEALFEVLDEIHRQPDSFSLSMLSVPAPESVVDSLPLKIYEKPNRADCEDEKLNTANHGDEKPNAADSNDDVDQCYICLVEYEEGDKIRVLPCHHVYHMSCVDKWLKEVHGICPLCRGDVRGGVREGTASSSNADT*

Click here to download the sequence:
Link to NCBI Protein BLAST