Transcript Information: S_Transcript_466070.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1446452144164
Replicate 20.71170288895209
Replicate 30.19830899014624
Condition 2: 8 Hour
Replicate 11.3758316333634
Replicate 20
Replicate 30.68760798725746
Condition 3: 24 Hour
Replicate 10.46978244065794
Replicate 20.97478759468161
Replicate 30.27120477854963


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_466070.p1 GENE.S_Transcript_466070~~S_Transcript_466070.p1 ORF type:internal len:93 (-),score=16.34,gag_pre-integrs|PF13976.2|7.4e-18 S_Transcript_466070:2-277(-)
TTTGAACTGGTTCAGCTAACATATTTATGGCTGCAAGTCTTAACATGGCTGAGAGTGCGAGGATCATGGCTTTTTGCAGGGAGCATGAACAACCTGCATATGGTTGCACAAAACCTCTGGCATTATCGTCTAGGCCATATCAATGAGAAACGCATTCAAAAGCTCCATAAAGATGGAATTCTTGATTCATTTGACTTTGAGTCATTTGAGGTTTGTGAAGCTTGTTTGATGGGCAAGATGACTAAATCACCCTTCACCGGGAAGGGTGAAAGAGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_466070.p1 GENE.S_Transcript_466070~~S_Transcript_466070.p1 ORF type:internal len:93 (-),score=16.34,gag_pre-integrs|PF13976.2|7.4e-18 S_Transcript_466070:2-277(-)
FELVQLTYLWLQVLTWLRVRGSWLFAGSMNNLHMVAQNLWHYRLGHINEKRIQKLHKDGILDSFDFESFEVCEACLMGKMTKSPFTGKGERA

Click here to download the sequence:
Link to NCBI Protein BLAST