Transcript Information: S_Transcript_46634.p1


Annotated TAIR IDAT4G29080.1
Annotated Gene Namephytochrome-associated protein 2
Annotated Gene Symbol(s)PAP2, IAA27
Annotation TypeHomolog
Chromosome Positionchr4:14323665-14325213 | Reverse length=305
E-Value2E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.625561069214
Replicate 235.300463292024
Replicate 324.088471619397
Condition 2: 8 Hour
Replicate 149.26600375305
Replicate 235.521016819811
Replicate 347.677895867469
Condition 3: 24 Hour
Replicate 136.735069380101
Replicate 230.989293379904
Replicate 338.399275767789


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46634.p1 GENE.S_Transcript_46634~~S_Transcript_46634.p1 ORF type:complete len:245 (+),score=66.30,AUX_IAA|PF02309.12|5e-41 S_Transcript_46634:290-1024(+)
ATGTCAAGGGCCTTAAAAGAACATGATTACATAGGCTTATCAGAGGTTTCTTCAAATGAACAAACCTCTGACAAGTCCAAAATAACTTCAAATTTGAGTGAGAAAACCAGCAAAGGTCTCAACTTGAAGGCAACTGAGCTTAGGCTTGGCTTGCCAAGTTCAGAATCCCCTGAAAGAGTTCATCTTGATGATGATAATGGTGTTAATTACCCACTCTGGGTAGCCAAGAATTTTGTTTCTGGTGCTAAAAGGGGCTTCTCTGATGCCATCAATGGAGAATCTGGCAAGTGGGTTTTCTCTATAAATGGTGGATCTGAAATGGATTCTCTGAAAAATGGTGTTTCTATGCCTTCCTCTGTTGTGGGAGATGACGATAAAAAGTTGCAGTTACAGAGTTCCCCTGTTTCTGGACAGGGCACAGCTACTCATGATTCTTCTAAGGCACAGGTTGTAGGATGGCCACCCATTCGATCATTTCGGAAGAACTCCATGGCTGTCAGTACCCCAAAAGTCTCTGACAACAAAGACTGCAAGTTGGAATCAGGGTGCCTTTTTGTAAAGGTCAGTATGGATGGTGCTCCGTACCTTAGGAAAGTTGATCTCAGAACCTATGGCAGTTATGTGGAGCTTTCCTCAGCCCTTGAGAAAATGTTCAGTGGCTTTACTGTTGGTAAGTTCTCTGTACAATGGTTCCTGCATCCAAACCTTTGTTTTCTCATGTCTTTGTATGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46634.p1 GENE.S_Transcript_46634~~S_Transcript_46634.p1 ORF type:complete len:245 (+),score=66.30,AUX_IAA|PF02309.12|5e-41 S_Transcript_46634:290-1024(+)
MSRALKEHDYIGLSEVSSNEQTSDKSKITSNLSEKTSKGLNLKATELRLGLPSSESPERVHLDDDNGVNYPLWVAKNFVSGAKRGFSDAINGESGKWVFSINGGSEMDSLKNGVSMPSSVVGDDDKKLQLQSSPVSGQGTATHDSSKAQVVGWPPIRSFRKNSMAVSTPKVSDNKDCKLESGCLFVKVSMDGAPYLRKVDLRTYGSYVELSSALEKMFSGFTVGKFSVQWFLHPNLCFLMSLYV*

Click here to download the sequence:
Link to NCBI Protein BLAST