Transcript Information: S_Transcript_466398.p1


Annotated TAIR IDAT2G22440.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Ribonuclease H-like superfamily protein (TAIR:AT4G29090.1); Has 208 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:9528910-9529917 | Forward length=256
E-Value8E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43273172740131
Replicate 20.17937227282532
Replicate 30.14994094376911
Condition 2: 8 Hour
Replicate 10.52013147114959
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.20505727158631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_466398.p1 GENE.S_Transcript_466398~~S_Transcript_466398.p1 ORF type:5prime_partial len:123 (+),score=20.83 S_Transcript_466398:3-371(+)
GAAGGGTTAAAGTGCAGGATTGAGGATGGGAGGAAGGTTAGAGAATGGGATATGGCTTGGCTTCCAGGTAACTCTTCGAGCTTGGTCCCTACGCTTAATCTGAATTCAAACCCTGATTTGCTTGTAGAAGAATTGATTGATTATGAGAATATCTGCTGGAAGGAGGATGCCTTGACTAACTTTTGCAATCAGGAGGATGCAAAATTGATAAGGAGCATACCGCTGAGCCCTCGCTTCTCTCCTGATACAGTGTACTGGTGGCCTACCAAGAATGGATGCTTTTCAACGAAATCTGCCTATTGGTTAGGAGTTATGGGAGCCGCTGTAATACCCCAAGATTTAATGGTTGGAAAGTGCTTAATGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_466398.p1 GENE.S_Transcript_466398~~S_Transcript_466398.p1 ORF type:5prime_partial len:123 (+),score=20.83 S_Transcript_466398:3-371(+)
EGLKCRIEDGRKVREWDMAWLPGNSSSLVPTLNLNSNPDLLVEELIDYENICWKEDALTNFCNQEDAKLIRSIPLSPRFSPDTVYWWPTKNGCFSTKSAYWLGVMGAAVIPQDLMVGKCLMV*

Click here to download the sequence:
Link to NCBI Protein BLAST