Transcript Information: S_Transcript_466671.p1


Annotated TAIR IDAT5G04560.2
Annotated Gene NameHhH-GPD base excision DNA repair family protein
Annotated Gene Symbol(s)DME
Annotation TypeHomolog
Chromosome Positionchr5:1309786-1318091 | Forward length=1987
E-Value1E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.096862606861439
Replicate 20.16060265373987
Replicate 30.25172069267881
Condition 2: 8 Hour
Replicate 10.23285230555559
Replicate 20.2849917024169
Replicate 30.15516540567775
Condition 3: 24 Hour
Replicate 10.17889349537338
Replicate 20.16497770028278
Replicate 30.18359995927291


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_466671.p1 GENE.S_Transcript_466671~~S_Transcript_466671.p1 ORF type:internal len:1099 (+),score=236.90,RRM_DME|PF15628.2|3.5e-30 S_Transcript_466671:3-3296(+)
AAAAATGAAGAATCTCCCCAGAAAAGGAACAACAAGAGAAAGAGCAACCCGGAGTTAAACAAGAAGCAGCCTAAGGAGAAACGGCAAAATAAATATTATTGGCCAAAGATAGACGTTGAAAAGAAGTCTACTCCAAAGCCTAAGACTCCAAAGACGAAAACTCCAAAGCCTAAGGCGACTCCGAAGCCAGCAACTCCCAAGCCAAAGAGGAAGTATGAGCGTAAGAAGAAGGAGGGTGTCATCAACTCCAAAAGCCCTGATGATCAAATGCCAAAGGATGAAATTCCGAAGGAGGCAACATGTCAACGAGCTCTGAATTTTAATGATGATCATCAGATTGTGCACTTGGGTGACAATGAACAAAATGTTCAAGTGGAGGAATTCAAGCCCAGCACTTCCAGTAGTAACTCCAATGACGCAGACATTACTGAAACGCGATCTCAGGAGATGTGTACGAGTTGTGTTGAGGTCCAAAATGTGCGGAAAAGTTGCAGAGTTTTTCTTAGAAAACTTGGAAGCGAGTGTCTTATTGAGTGTCATAATCTTGGGTTTAATATTCAAGAGAACAGCAGGAGAAGGAGGATGATGAGACCCAAAAAGTCAAATGAGGCGTTGAAAAAATTTGTTGGTTTTAGTAAGTTTATGATAGTCCAGGATTTGCTTGATCGGATTGCCATTATAAGAGGTAAGGGAAGAATGTTGTTGCCTTTGAAAGAGGAGATTGCTCAAGAATCATTCAACTGTGTTTTGAGCTTGCTTTCGTCACCAATTAATTTAAGAAAGAAAAGAAGCTTGACAAGAAGAATTGCTCGAGGTTCCAGGATTACAAAGGAAATGTCGTCTCTTGGCTCTCCTACCATATTGGAATCTTCTAGCAACAAAGATGACAGCGAAATGGCTTCGAAAGAGACCCCTAATACTAATTGCTCATCATTAGGTGATAATTTGATTGAGGCAGAGACTATAGAGAGGGTTGAGATGCAAGAAGACATAAACGAAAGTCATTTTGACAACCAAACACAGCAAACAAGCCATCAACATGCTTCTTTGTGCAATTCTAATATGAAAGATGGCTTCTCATCTCAAGCTAGTAAAACACCAAAGACCAAACAAAAGAAGGGACGCCCCTCTAAACGCAAGCCAAAGCGTGTTGATTATACAAGCAACTTAACTGATGGAAGCTCAATTGAGCAAATTATGGACTTGTTTACGCAACACTTTAAATCACTAGACCTCTATGACAACCCCAAGACACTAGAGAGGTGGAGTGTACTAAACAGTGAAGAAGAAAGCAAAGGAGAAGAGGGTAAAGAAACATATGAAGAGAAGAAAAAGTGGGAAGATGAAAGAAGAGAACTTCTTCAAAGAATAGCCAAGTTCATTTACGTCATGACTCGAAGTCAAGGGCCAAGGGATTTTGTGAAATGGAATGGTTCTGTGGTGGATTCAGTGGTTGGTGTTTTCCTTACCCAAAATGTGTCAGATGTTCTTTCAAGCAATGCATACATGAAGTTGGGTTCGCGATATCCCCTGAAGTCATCAAGCAAAGAAAATGGGGTATTTGATGAAGATTCAGAAATCAATAACAGTGAAGGATCTTCTTCAAGTAGGGGTGCATATGTAGTGGTTGAGCCTCCAGATGAAGAAGAGGAAGCCACTGGAGAGGAGGAAGTAAGATCCGAAGAATTTGATGCTGCTTTGAAGGAGATGTTGGATTCATTATCTGACTTGAAGGCTAGTAAAGGCAAAGGAAAACATGCAGAAGAGAGGGAGAAGATTGATTGGGAAGCCATTAGAGTTAAGTATGCAGGGGAAGGCAAAACAGAAAGGCCCTTTGATGCTCGAGATTCTGTTGATTGGGAAGCGGTGAGGAATGCACCTGTTAAAGACATTGCTGAAGCTATTCATGGTAGAGGCCAACATACCATCATTGCTGAGAAAATCAAGAAAACTTTGAATCGACTTGTCGAGCAACACGGATGTCTTGATTTGGAATGGTTACGTAAAGCCCCACCTCAAGTAGCAAAGGCATATTTACTGAGCTTCTACGGGCTTGGCTTGAAAAGTGTCGAGTGTTTACGACTTTTAACACTTCACCATCATGCCTTTCCGGTTGATGTAAATATTGGTCGAATAGCGATCCGTCTTGGTTGGGTTCCTATCAAGCCACTGCCTATGGGCCTGCATTTTCATCTTCTTGAGAAGTACCCATTGGAAAATGAAATTCAACAGTATTTGTGGCCAAGATTGTGCCATCTTGACCAAAAAATATTGTACAAGCTACACTATCATATGATTACTTTCGGGAAGATATTTTGTGTGAAGAAAAATCCAAATTGTGGAGCTTGTCCATTCAAAGGAGAATGCAAATACTATGCAAGCGTAGTTGCAAGCAAACTTGCCCTGCCAAAAGCAGAAGAAAAAAGGATGACAAAATCGAAGAAAAATGTTAAAAGATTTATTAGAAATCCATTTGACATCAAGAGAAGATCATCGTCAAGATATTTGTCTGTCCCAGCTTCGAATTATGATAAAAATCTGGAGATGATATCATCAAATTGTACTGCAATGGAAAAAAATGAGCCTATAGTAGAGATGCCGCCATCTCCTTCTCCCGAACCAGAAGTGGTAGAACCAAAGGTGACGGACATTGAAGATTTATTCACCTATGATAACAATGAGGTTGAGGAGGAAATTTATGAAATTAAGCTCAATACAGAGGAGTTTAAACAGACATTTTGGAACTACATTGAAGAGAATAATGTACCTCTCAACAAAAATGATGATATATCAAGAGCTCTTGTTAGCCTTTCACCAGAAGATGTTCCTATTCCTTTACCCAAACATATGGTCATTGCTCGTTTGAGAACCGAGCATCAAGTATACGAGTTACCCGATGGTCATCCGCTTCTCAAAAATTTGGATCGACGAGATGAGAAAGATCCTTTACCATATCTTCTTGCCATATGGACATCAGATCAAATAAGGAGTGCAGAAACTTTGCAAGAATGTGGTGCTTGCAGTAATGAGCCTTGTTCAGAAAATCGTTCTTTAACTGTTGCTGGAACCTTTTTGATACCATCTCGGACAGCATTGAGAGGATCTTTTCCACTCAATGGTACATATTTCCAGGTGAATGAGGTTTTTGTTGATGATGAAACTAGCGAGCAGCCAATCAATGTTCCAAGAGCCTGGATATGGAACCTACCAAGGCGCACTATGTATTGTGGATATAGTACAACCTCAATATTCAGAGGTTTAACATGGAGGGAGATTCAACGGTGTTGTTGCGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_466671.p1 GENE.S_Transcript_466671~~S_Transcript_466671.p1 ORF type:internal len:1099 (+),score=236.90,RRM_DME|PF15628.2|3.5e-30 S_Transcript_466671:3-3296(+)
KNEESPQKRNNKRKSNPELNKKQPKEKRQNKYYWPKIDVEKKSTPKPKTPKTKTPKPKATPKPATPKPKRKYERKKKEGVINSKSPDDQMPKDEIPKEATCQRALNFNDDHQIVHLGDNEQNVQVEEFKPSTSSSNSNDADITETRSQEMCTSCVEVQNVRKSCRVFLRKLGSECLIECHNLGFNIQENSRRRRMMRPKKSNEALKKFVGFSKFMIVQDLLDRIAIIRGKGRMLLPLKEEIAQESFNCVLSLLSSPINLRKKRSLTRRIARGSRITKEMSSLGSPTILESSSNKDDSEMASKETPNTNCSSLGDNLIEAETIERVEMQEDINESHFDNQTQQTSHQHASLCNSNMKDGFSSQASKTPKTKQKKGRPSKRKPKRVDYTSNLTDGSSIEQIMDLFTQHFKSLDLYDNPKTLERWSVLNSEEESKGEEGKETYEEKKKWEDERRELLQRIAKFIYVMTRSQGPRDFVKWNGSVVDSVVGVFLTQNVSDVLSSNAYMKLGSRYPLKSSSKENGVFDEDSEINNSEGSSSSRGAYVVVEPPDEEEEATGEEEVRSEEFDAALKEMLDSLSDLKASKGKGKHAEEREKIDWEAIRVKYAGEGKTERPFDARDSVDWEAVRNAPVKDIAEAIHGRGQHTIIAEKIKKTLNRLVEQHGCLDLEWLRKAPPQVAKAYLLSFYGLGLKSVECLRLLTLHHHAFPVDVNIGRIAIRLGWVPIKPLPMGLHFHLLEKYPLENEIQQYLWPRLCHLDQKILYKLHYHMITFGKIFCVKKNPNCGACPFKGECKYYASVVASKLALPKAEEKRMTKSKKNVKRFIRNPFDIKRRSSSRYLSVPASNYDKNLEMISSNCTAMEKNEPIVEMPPSPSPEPEVVEPKVTDIEDLFTYDNNEVEEEIYEIKLNTEEFKQTFWNYIEENNVPLNKNDDISRALVSLSPEDVPIPLPKHMVIARLRTEHQVYELPDGHPLLKNLDRRDEKDPLPYLLAIWTSDQIRSAETLQECGACSNEPCSENRSLTVAGTFLIPSRTALRGSFPLNGTYFQVNEVFVDDETSEQPINVPRAWIWNLPRRTMYCGYSTTSIFRGLTWREIQRCCCE

Click here to download the sequence:
Link to NCBI Protein BLAST