Transcript Information: S_Transcript_466673.p1


Annotated TAIR IDAT5G04560.2
Annotated Gene NameHhH-GPD base excision DNA repair family protein
Annotated Gene Symbol(s)DME
Annotation TypeHomolog
Chromosome Positionchr5:1309786-1318091 | Forward length=1987
E-Value2E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49810430119322
Replicate 20.41293991150429
Replicate 30.73968192848665
Condition 2: 8 Hour
Replicate 11.0833754439185
Replicate 20.59817777111569
Replicate 30.91190791892968
Condition 3: 24 Hour
Replicate 10.23363511754646
Replicate 20.36359056004835
Replicate 30.80926345684864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_466673.p1 GENE.S_Transcript_466673~~S_Transcript_466673.p1 ORF type:complete len:374 (+),score=64.72,RRM_DME|PF15628.2|5e+03,RRM_DME|PF15628.2|1.7e-41 S_Transcript_466673:113-1234(+)
ATGATTACTTTCGGGAAGATATTTTGTGTGAAGAAAAATCCAAATTGTGGAGCTTGTCCATTCAAAGGAGAATGCAAATACCATGCAAGTGTAGTTGCAAGCAAACTTGCCCTACCAAAAGGAGAAGAAAAAAGGATGACAAAATCGAAGAAAAATGTTAAAAGATTTATTAGAAATCCATTTGACATCAAGAGAAGATCGTCGTCACAATATATGTCTCTCTCAGCTTCAAATTATGACAAAAATCTCGAGATGACACCATCGAACAGTACTGCAATGGAAAAAAATGAGCCTATAGTAGAGATGCCGCCATCTCCTTCTCCCGAACCAGAAGTGGTAGAACCAAAGGTGACGGACATTGAAGATTTATTCACCTATGATAACAATGAGGTTGAGGAGGAAATTTATGAAATTAAGCTCAATACAGAGGAGTTTAAACAGACATTTTGGAACTACATTGAAGAGAATAATGTATCTCTCAACAAAAATGATGACATATCAAGAGCTCTTGTTAATCTTTCACCAGAAGATGTTGCTATTCCTTTACCCAAACATATGGTCATTGCTCGTTTGAGAACCGAGCATCAAGTGTATGAGTTACCAGATGGTCATCCGCTCCTCAAAGATTTGGATCGACGAGATGTGAAAGATCCTTTGCCATATCTTCTTGCCATATGGATATCAGATCAAACAGAAAGCAGTGTAGAAACTTTGAAAGAATGTGATAGTTGCAGTAATGAGCCTTGTTCAGAAAATCGTTCTTTAACTGTTGCTGGAACCTTTTTGATACCATCTCGGACAGCATTGAGAGGATCTTTTCCACTCAATGGTACATATTTCCAGGTGAATGAGGTTTTTGTTGATGATGAAACTAGCGAGCAGCCAATCGATGTTCCAAGAGCTTGGATATGGAATCTACCAAGGCGTACTATGTATTGTGGATATAGTACAACCTCAATATTCAGAGGTTTAACATGGAGGGAGATTCAACGGTGTTGTTGCGAAGGCTTTATCTGTACTAGAGGATTTAATCGGCAAACACGTGGACCAAAGCATTTACCACTCAGATTTCATAATCGTCCAAAGTATAAATCTCAACAAGATGAAGAATATGATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_466673.p1 GENE.S_Transcript_466673~~S_Transcript_466673.p1 ORF type:complete len:374 (+),score=64.72,RRM_DME|PF15628.2|5e+03,RRM_DME|PF15628.2|1.7e-41 S_Transcript_466673:113-1234(+)
MITFGKIFCVKKNPNCGACPFKGECKYHASVVASKLALPKGEEKRMTKSKKNVKRFIRNPFDIKRRSSSQYMSLSASNYDKNLEMTPSNSTAMEKNEPIVEMPPSPSPEPEVVEPKVTDIEDLFTYDNNEVEEEIYEIKLNTEEFKQTFWNYIEENNVSLNKNDDISRALVNLSPEDVAIPLPKHMVIARLRTEHQVYELPDGHPLLKDLDRRDVKDPLPYLLAIWISDQTESSVETLKECDSCSNEPCSENRSLTVAGTFLIPSRTALRGSFPLNGTYFQVNEVFVDDETSEQPIDVPRAWIWNLPRRTMYCGYSTTSIFRGLTWREIQRCCCEGFICTRGFNRQTRGPKHLPLRFHNRPKYKSQQDEEYDD*

Click here to download the sequence:
Link to NCBI Protein BLAST