Transcript Information: S_Transcript_46683.p2


Annotated TAIR IDAT3G55760.1
Annotated Gene Nameunknown protein; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast hits to 125 proteins in 40 species: Archae - 0; Bacteria - 3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20700648-20702886 | Forward length=578
E-Value1E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81054826096996
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.21650142453942
Replicate 20
Replicate 30.21640454421301
Condition 3: 24 Hour
Replicate 10.33266320036438
Replicate 20.23008945762789
Replicate 30.38409204677842


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46683.p2 GENE.S_Transcript_46683~~S_Transcript_46683.p2 ORF type:complete len:197 (+),score=41.94 S_Transcript_46683:351-941(+)
ATGGCGTCCCACGTAGCGCACCACCACGCCATTGTTAGACCTTCAAGACCAACTACTCACACGCTTCTCCATTCCAGTAATAAACCTAAACTCATCACCATTTCAATAGCAACAACCAGAAGAAGAGCAAGAAAGCATGCTGATCACCGAATTAGGGCTTGGAATGGTGGTGAGTCGTACCTGGGGATGTGGAAGAGAGCTGTTGACAGAGAGAAGAGAGAGTCTGAGTTCCTCAAAATTGCCGAGAACTCCGATGGCGGTGCGGGTTCGGATGCTGAACCTGAGAAGGAGAGCCCTGAGGTTCTGGAAAGGAGGAGTCAGGAGTTCCAGAAGATTCTGGGAGTTTCTAGAGAGGAGAGAGATAAGATTCAGAGAATGCAGGTCATTGATCGCGCTGCTGCCGCCATTGCTGCTGCTCGCGCTCTCCTCAAAGAGATTCCTCCTCCTCCAGCTCCGTCTCACACTCAGAAGCTGAGGGCCGCAAATGTTGGCCCTCAATCTAGTGGCGGTGGTAAATTTCATTTTTTTTTTTTTGGGTGCAAATTCAGTTCAGTTGCAGTTCGATGGAGTGAGTTAGTTTTAGTTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46683.p2 GENE.S_Transcript_46683~~S_Transcript_46683.p2 ORF type:complete len:197 (+),score=41.94 S_Transcript_46683:351-941(+)
MASHVAHHHAIVRPSRPTTHTLLHSSNKPKLITISIATTRRRARKHADHRIRAWNGGESYLGMWKRAVDREKRESEFLKIAENSDGGAGSDAEPEKESPEVLERRSQEFQKILGVSREERDKIQRMQVIDRAAAAIAAARALLKEIPPPPAPSHTQKLRAANVGPQSSGGGKFHFFFFGCKFSSVAVRWSELVLVR*

Click here to download the sequence:
Link to NCBI Protein BLAST