Transcript Information: S_Transcript_46700.p1


Annotated TAIR IDAT1G62750.1
Annotated Gene NameTranslation elongation factor EFG/EF2 protein
Annotated Gene Symbol(s)ATSCO1, ATSCO1/CPEF-G, SCO1
Annotation TypeOrtholog
Chromosome Positionchr1:23233622-23236321 | Reverse length=783
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1390.66004085885
Replicate 2464.46072006622
Replicate 3495.15952030516
Condition 2: 8 Hour
Replicate 1138.15729509749
Replicate 2137.64901315832
Replicate 3143.20912260872
Condition 3: 24 Hour
Replicate 1425.4235895946
Replicate 2449.61339329239
Replicate 3424.15708261584


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46700.p1 GENE.S_Transcript_46700~~S_Transcript_46700.p1 ORF type:complete len:792 (+),score=201.90,GTP_EFTU|PF00009.23|3.4e-71,EFG_IV|PF03764.14|4.4e-46,EFG_II|PF14492.2|3.8e-31,EFG_C|PF00679.20|2.8e+03,EFG_C|PF00679.20|9.5e+03,EFG_C|PF00679.20|6.3e-25,GTP_EFTU_D2|PF03144.21|1.2e-14,RF3_C|PF16658.1|1.1e-06 S_Transcript_46700:356-2731(+)
ATGGCAGGAGAAGCAGTAAGAGTAAGGGGGACAGTAGAACCCTTATGCAACATCAATGGCTCAAGAGGAAGGCCACTCTCTCTCTCCTCTCAACGACGTCGTGGCCGTGTTTCTGCTGCCACTCGTAATACTATCACCAATAAACGCTGTCTTTCATCTCTTGCTTCTTCTTCACTCTCTGACTTCTTTGGCCGTGTTCGTATTAACCTCTCTAATGTGCAGTCTTTACAACCCCAACAAAGGAAGAACTTCTCTGTTTTTGCTATGGCTGCTGATGAGTCTAAGCGTAAGGTGCCATTGAAAGATTATCGTAATATTGGAATTATGGCTCACATCGATGCTGGAAAGACTACTACAACAGAGAGGATCCTGTACTATACCGGAAGAAACTACAAGATTGGTGAGGTGCATGAGGGAACTGCAACTATGGACTGGATGGAGCAAGAGCAAGAAAGAGGGATCACCATCACTTCTGCTGCAACTACAACCTACTGGAACAAGCACCGCATCAACATTATTGATACTCCTGGCCATGTCGACTTCACACTGGAGGTGGAGCGGGCTCTTAGGGTTCTGGATGGTGCCATATGCTTGTTTGACAGTGTTGCTGGGGTGGAACCACAGTCTGAAACTGTGTGGAGACAAGCAGATAAATATGGGGTGCCTCGGATATGTTTTGTTAACAAGATGGACCGCCTTGGTGCAAACTTCTTTAGGACAAGAGATATGATAGTCACTAATTTGGGTGCTCAACCTCTGGTGATTCAGTTGCCTATTGGTGCTGAGGACACTTTTAAGGGAGTTATTGATCTTGTGAAAATGCAAGCTATTGTTTGGTCAGGTGAAGAGTTGGGTGCAAAGTTCAATTGTGAGGAAATTCCTGCAGATCTTCAGGAGATGGCAGCTGATTACCGGGCACAGCTTATAGAAACCATAGTAGAATTAGATGATGAGGCCATGGAGAATTATTTGGAGGGGAAGGAACCTGATGAGGAAACAATTAAGAAACTAATTAGAAAAGGAACCATCTCGGCCAGTTTTGTGCCAGTTATGTGTGGTTCGGCATTTAAAAATAAGGGTGTTCAACCTTTGCTTGATGCAGTGGTAGATTATCTGCCTGCACCAATTGACTTGCCTGCAATGAAGGGTACTGATCCTGAAAACCCTGAATTGGTCTTGGAGAGGGAGGCTAAAGATGAAGAACCATTTGCCGGATTGGCTTTCAAGATCATGAGCGACCCATTTGTGGGTTCCCTTACATTTGTGAGAGTTTATGCTGGTAAGCTAGCGGCTGGGTCTTATGTATTGAATTCAAACAAGGGAAAGAAAGAAAGAATTGGCAGGCTCTTGGAAATGCATGCGAACAGCAGAGAGGATGTTAAGGTGGCATTAACAGGTGATATAATTGCTCTTGCTGGGCTCAAAGATACCATTACTGGTGAAACACTGTGTGATCCTGAGAAGCCTATAGTTCTTGAACGAATGGATTTCCCTGACCCCGTCATTAAGGTTGCTATTGAGCCCAAGACTAAGGCTGATATTGACAAAATGGCAACTGGTTTAATAAAGCTTGCCCAAGAAGATCCATCATTCCACTTTTCACGTGATGAAGAGATCAATCAGACAGTCATTGAAGGAATGGGTGAACTTCACCTTGAGATTATTGTCGACCGGCTCAAAAGGGAGTTTAAGGTCGATGCTAATGTCGGTGCACCACAAGTGAACTACCGTGAAAGTATATCCAAGGTTTCGGAAGTGAAATATGTTCACAAGAAACAGTCAGGTGGGCAGGGTCAGTTTGCTGATATTACAGTGCGCTTTGAACCCTTGGAGCCTGGCAGTGGGTACGAGTTTGTCAGTGAAATAAAGGGAGGTGCAGTCCCCAAGGAATATATCCCTGGGGTAGTGAAGGGATTGGAAGAGTGTATGAACAACGGTGTGCTTGCAGGCTTTCCTGTGGTCGATGTGCGTGCTGCCTTGGTGGATGGTTCATACCATGACGTTGATTCTAGTGTGCTAGCGTTCCAGCTGGCAGCCAGAGGGGCTTTCAGGGAGGGAATGAGGAAAGCTGGTCCAAAGATGTTGGAGCCAATAATGAAAGTCGAAGTTGTTACACCTGAAGAGCACTTGGGAGATGTGATTGGTGATCTCAACTCCAGGAGAGGGCAAATCAATAGCTTTGGTGACAAGCCTGGTGGTCTAAAGGTAGTGGATTCTTTGGTTCCCTTGGCAGAGATGTTCCAGTATGTGAGTACATTGCGGGGCATGACAAAAGGGCGTGCATCCTACACGATGCAACTAGCCAAATTCGATGTCGTTCCCCAGCATATTCAGAACCAGCTTGCTGCCACGAAGGAGGAATCTGTTGCTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46700.p1 GENE.S_Transcript_46700~~S_Transcript_46700.p1 ORF type:complete len:792 (+),score=201.90,GTP_EFTU|PF00009.23|3.4e-71,EFG_IV|PF03764.14|4.4e-46,EFG_II|PF14492.2|3.8e-31,EFG_C|PF00679.20|2.8e+03,EFG_C|PF00679.20|9.5e+03,EFG_C|PF00679.20|6.3e-25,GTP_EFTU_D2|PF03144.21|1.2e-14,RF3_C|PF16658.1|1.1e-06 S_Transcript_46700:356-2731(+)
MAGEAVRVRGTVEPLCNINGSRGRPLSLSSQRRRGRVSAATRNTITNKRCLSSLASSSLSDFFGRVRINLSNVQSLQPQQRKNFSVFAMAADESKRKVPLKDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTYWNKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAQPLVIQLPIGAEDTFKGVIDLVKMQAIVWSGEELGAKFNCEEIPADLQEMAADYRAQLIETIVELDDEAMENYLEGKEPDEETIKKLIRKGTISASFVPVMCGSAFKNKGVQPLLDAVVDYLPAPIDLPAMKGTDPENPELVLEREAKDEEPFAGLAFKIMSDPFVGSLTFVRVYAGKLAAGSYVLNSNKGKKERIGRLLEMHANSREDVKVALTGDIIALAGLKDTITGETLCDPEKPIVLERMDFPDPVIKVAIEPKTKADIDKMATGLIKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVDANVGAPQVNYRESISKVSEVKYVHKKQSGGQGQFADITVRFEPLEPGSGYEFVSEIKGGAVPKEYIPGVVKGLEECMNNGVLAGFPVVDVRAALVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPKMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAKFDVVPQHIQNQLAATKEESVAA*

Click here to download the sequence:
Link to NCBI Protein BLAST