Transcript Information: S_Transcript_467168.p1


Annotated TAIR IDAT3G47470.1
Annotated Gene Namelight-harvesting chlorophyll-protein complex I subunit A4
Annotated Gene Symbol(s)LHCA4, CAB4
Annotation TypeOrtholog
Chromosome Positionchr3:17493622-17494773 | Reverse length=251
E-Value4.8E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10862449483747
Replicate 20.090052202275571
Replicate 30.15055294762123
Condition 2: 8 Hour
Replicate 10.34816963783074
Replicate 20.091313667917252
Replicate 30.34801383844868
Condition 3: 24 Hour
Replicate 10.26748836927258
Replicate 20.092505353372847
Replicate 30.20589424004176


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_467168.p1 GENE.S_Transcript_467168~~S_Transcript_467168.p1 ORF type:complete len:245 (+),score=-13.22,Chloroa_b-bind|PF00504.17|2.7e-45 S_Transcript_467168:56-790(+)
ATGGCGTCCGTCACCGCCCGCGCCCCGGTCGCAGCCCTCCGTCCGTCGGCGTCGCTCAAGTCTACCTTCCTAGGGCAATCCTCCACCCGTCTTGCCCGCGCACCGACTACGAGGCGTAATGTTCGGGCGGAGGCCAAGGGAGAGTGGCTCCCCGGCCTCCCTTCTCCCACCTACCTCAACGGCAGCTTGCCAGGCGATAACGGGTTCGACCCGTTGGGTCTGGCGGAGGACCCGGAGAACCTGCGGTGGTTCGTGCAGGCGGAGCTGGTGAACGGGCGGTGGGCGATGCTGGGGGTGGCCGGGATGCTGCTGCCGGAGGTGCTGACGAAGATCGGGTTGATCGACGCGCCGCAGTGGTACGACGCCGGCAAGGCCACCTACTTCGCGTCGTCGTCGACGCTGTTCGTCATCGAGTTCATCCTGTTCCACTACGTGGAGATCCGGCGGTGGCAGGACATCAAGAACCCTGGCTGCGTCAACCAGGACCCCATCTTCAAGAGCTACAGCCTCCCGCCGCACGAGTGCGGCTACCCCGGCAGCGTCTTCAACCCCCTCAACTTCGAGCCCACCCTCGAGGCCAAGGAGAAGGAGCTCGCCAACGGGAGGCTGGCGATGCTGGCGTTCTTGGGGTTCCTGGTGCAGCACAACGTGACGCAGAAGGGGCCCTTCGACAACCTGCTGCAGCACCTGTCTGACCCGTGGCACAACACCATCATCCAGACGCTGTCAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_467168.p1 GENE.S_Transcript_467168~~S_Transcript_467168.p1 ORF type:complete len:245 (+),score=-13.22,Chloroa_b-bind|PF00504.17|2.7e-45 S_Transcript_467168:56-790(+)
MASVTARAPVAALRPSASLKSTFLGQSSTRLARAPTTRRNVRAEAKGEWLPGLPSPTYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVLTKIGLIDAPQWYDAGKATYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPIFKSYSLPPHECGYPGSVFNPLNFEPTLEAKEKELANGRLAMLAFLGFLVQHNVTQKGPFDNLLQHLSDPWHNTIIQTLSG*

Click here to download the sequence:
Link to NCBI Protein BLAST