Transcript Information: S_Transcript_46749.p1


Annotated TAIR IDAT2G45660.1
Annotated Gene NameAGAMOUS-like 20
Annotated Gene Symbol(s)AGL20, SOC1, ATSOC1
Annotation TypeOrtholog
Chromosome Positionchr2:18807799-18810193 | Reverse length=214
E-Value2E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 193.268712662183
Replicate 291.213292013244
Replicate 378.637777467575
Condition 2: 8 Hour
Replicate 182.932073455517
Replicate 274.572828799089
Replicate 368.783082317926
Condition 3: 24 Hour
Replicate 1106.39267329678
Replicate 293.698072859621
Replicate 388.860999038395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46749.p1 GENE.S_Transcript_46749~~S_Transcript_46749.p1 ORF type:complete len:216 (+),score=48.38,K-box|PF01486.13|4.6e-27,SRF-TF|PF00319.14|4.9e-27 S_Transcript_46749:70-717(+)
ATGGTGAGAGGCAAGACGCAAATGAAGAGGATAGAAAACGCGACGAGCAGACAAGTGACGTTCTCAAAGCGTAGAAATGGGTTGTTGAAGAAAGCCTTTGAACTTTCGGTGCTATGTGATGCTGAAGTTGCTCTCATTATCTTCTCTCCCCGAGGCAAGCTCTATGAATTCGCCAGTCGCAGCATGCAGGAAACAATAAGACGTTATCAGAGGGACACACAAGATGCACACCCGGCCAAGGACAATGCTGCTCAACAAAATATGCAGGACTTGAAAGAGGAAACTGCGAGTCTGATGAAGAGGATTGAAGAAATTGAAGCTTCAAAACGGAGACTTCTTGGAGAGAATTTAGCATCTTGCAGTTTAGAAGAGCTGCAACAGCTGGAGCAGCAGCTGGAGAGAAGTGTTGGCAAAATTAGAGCAAGAAAGAACCAAGTCTTCAATGAACAAATACGGCAATTGAAAGAAAAGGAAAAACAACTTGCTGCTGAGAATGTAAGGCTTGCTGAAACGTATGGATTGTTACCAAAGGAATCGGCAAGAGCAGACACAGCATCTGAGGACACTAATAGCCAAATTTCCGATGTGGAGACCGATTTATTCATTGGATTGCCGGAGACGAGAATTAAGCGTGTCACTAATGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46749.p1 GENE.S_Transcript_46749~~S_Transcript_46749.p1 ORF type:complete len:216 (+),score=48.38,K-box|PF01486.13|4.6e-27,SRF-TF|PF00319.14|4.9e-27 S_Transcript_46749:70-717(+)
MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFASRSMQETIRRYQRDTQDAHPAKDNAAQQNMQDLKEETASLMKRIEEIEASKRRLLGENLASCSLEELQQLEQQLERSVGKIRARKNQVFNEQIRQLKEKEKQLAAENVRLAETYGLLPKESARADTASEDTNSQISDVETDLFIGLPETRIKRVTNG*

Click here to download the sequence:
Link to NCBI Protein BLAST