Transcript Information: S_Transcript_46880.p2


Annotated TAIR IDAT1G05940.1
Annotated Gene Namecationic amino acid transporter 9
Annotated Gene Symbol(s)CAT9
Annotation TypeOrtholog
Chromosome Positionchr1:1801365-1803942 | Reverse length=569
E-Value8.1E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.61349000342
Replicate 229.610585985086
Replicate 326.970768182408
Condition 2: 8 Hour
Replicate 139.524125662957
Replicate 239.61331093726
Replicate 336.86199209884
Condition 3: 24 Hour
Replicate 128.907514995072
Replicate 227.946354124218
Replicate 328.066635879377


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46880.p2 GENE.S_Transcript_46880~~S_Transcript_46880.p2 ORF type:complete len:266 (+),score=35.49,AA_permease_C|PF13906.2|5.4e+03,AA_permease_C|PF13906.2|1.4e+04,AA_permease_C|PF13906.2|3.2e-17,AA_permease_2|PF13520.2|2.1e-11,AA_permease_2|PF13520.2|4.4e+02,AA_permease|PF00324.17|2e-07,AA_permease|PF00324.17|5.5e+03 S_Transcript_46880:1565-2362(+)
ATGGTTCCCTACAATCTTCTCGGTGAAGATGCTCCATTGGCATCAGCCTTCACATCCAAAGGCTTGAAATTTGTCTCTGTTCTGATTAGTGTTGGTGCTGTTGCTGGGCTAACAACTACCCTGCTTGTTGGACTCTATGTTCAGTCTCGCTTATACCTTGGCCTTGGAAGGGATGGTTTATTACCTCAAATATTTGCTAAAGTACATCCAAAGCGGCACACACCAATTCATTCTCAGGTCTGGGTTGGTCTAGTTGCCGGTGTCATGGCAGGGCTGCTCAATGTGCATGTGCTTTCTCACATCCTCTCTGTGGGGACGTTGACTGGCTACTCCGTGGTGGCTGCTTGTGTTTTAAGCCTCCGGTTCAAAGATAAACCTTCAGATCAAGTTTCAGGCAGGTGGTGCTCAAGATGGGCAGAAGGAGTACTTTGGCTAGTTCTTTTGGCTTGCTGTGGTTTTGCAGCTGGAGCTATGTATCGTTTCGGTGCTTCCCTTTTCTTCTTGATCATTCCACTCGTCCTAGCTCTTGTTGCTTTAGTGTCTCTTTACGTCCGTCAAATATATATACATCCTCCAGGGTTTTCTTGTCCGGGAGTCCCATTCTTGCCAGCCCTTTGCATTTTCTTCAACCTATTCTTATTTGCCCAGCTGCACTATGAAGGATGGGTGAGATTCATTGTCATTAGCATCATTACAATGGGTATTTATGCTTTGTATGGCCAGTTTCATGCCGATCCAAGTTCAGAAAAAACAATTATATACCACAGGGCCTCTCCTGAGAGTCCACATTCACGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46880.p2 GENE.S_Transcript_46880~~S_Transcript_46880.p2 ORF type:complete len:266 (+),score=35.49,AA_permease_C|PF13906.2|5.4e+03,AA_permease_C|PF13906.2|1.4e+04,AA_permease_C|PF13906.2|3.2e-17,AA_permease_2|PF13520.2|2.1e-11,AA_permease_2|PF13520.2|4.4e+02,AA_permease|PF00324.17|2e-07,AA_permease|PF00324.17|5.5e+03 S_Transcript_46880:1565-2362(+)
MVPYNLLGEDAPLASAFTSKGLKFVSVLISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPQIFAKVHPKRHTPIHSQVWVGLVAGVMAGLLNVHVLSHILSVGTLTGYSVVAACVLSLRFKDKPSDQVSGRWCSRWAEGVLWLVLLACCGFAAGAMYRFGASLFFLIIPLVLALVALVSLYVRQIYIHPPGFSCPGVPFLPALCIFFNLFLFAQLHYEGWVRFIVISIITMGIYALYGQFHADPSSEKTIIYHRASPESPHSR*

Click here to download the sequence:
Link to NCBI Protein BLAST