Transcript Information: S_Transcript_46890.p1


Annotated TAIR IDAT5G66470.1
Annotated Gene NameRNA binding;GTP binding
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26541986-26544302 | Reverse length=427
E-Value1.8E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.850077113557
Replicate 213.214388468485
Replicate 313.381932514486
Condition 2: 8 Hour
Replicate 111.253504125136
Replicate 211.864753500224
Replicate 313.216950361928
Condition 3: 24 Hour
Replicate 19.4526672624207
Replicate 211.1226093752
Replicate 311.180220211239


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46890.p1 GENE.S_Transcript_46890~~S_Transcript_46890.p1 ORF type:complete len:379 (+),score=83.24,MMR_HSR1|PF01926.19|1.2e-22,FeoB_N|PF02421.14|3.1e-11,DUF258|PF03193.12|0.00017,DUF258|PF03193.12|0.0055,DUF258|PF03193.12|3e+03,ATP_bind_1|PF03029.13|3.2e+02,ATP_bind_1|PF03029.13|8.7e-06,Dynamin_N|PF00350.19|0.00075,Dynamin_N|PF00350.19|5.1 S_Transcript_46890:176-1312(+)
ATGGAGCTAATAGCGGTGCGAATACCCTCAATAGGAGACAGATTCTTCTCCCATAACTCCACTCTTACTTCTCTCTCACCATCTCCTTCTCAACGAATCTCCTGGTGTTCGCCCCTTCTTCACTTCAATGTCAGAAGCAGAGTTAGAAACCGAGGTGCCGGCATCTTGCAAGAGGAGAGAGAACCAAGTAATTTTAAGAGCTACGATTCTCATTATTACTCTTCAGATGGAGAACAGGAAGAGGATTCATCTTCTTCGTCGTCGTTTCTCTCTCTTAGCGAGAAGCCCGACAGGAACATGGCCTTGCTTGACGACTATGAGTTGGAGGAGAACGATTTTGACCCTAATTCCAATCATCGTAGCGGATATGTGGCTGTACTTGGCAAGTCAAATGTTGGGAAAAGCACTCTGTTAAACCAAATGATTGGTCAGAAGCTCTCAATTGTTACAGATAAACCTCAGACCACCAGACATCGAATCCTTGGTATATGTTCTGGCCCAGACTATCAGATGATACTTTATGATACACCTGGTGTTATTGAGAAGAAAATGCACAAACTGGACTCTATGATGATGAAGAATGTCCGAAGTGCTACCATCAATGCAGATTGTGTAGTTGTGGTGGTTGATGTCTGCAAGATGCCTGTAAAGATAGATGAAGTGCTTGAAGAAGGTATTGGAAACTTGACTGATAAGTTACCCACCTTGCTTGTTCTGAATAAGAAGGATCTCATCAAACCCGGTGAAACTGCAAAGAAACTCCAGTGGTATGAAAAGTTCACTGATGTTGATGAGGTGGTACCTGTCAGTGCTAAGTATGGCCATGGAGTTGATGATGTCAAAGAGTGGATTCTATCAAAACTTCCTACTGGCCCACCTTATTATCCAAAGGATATTGCAAGTGAGCATCCTGAAAGATTTTTCGTAGCTGAAATTGTTAGAGAGAAGATCTTTATGCAATACAAGAATGAAGTTCCATATGCATGCCAGGTTAATGTAGTGAGTTACAAATCTAGGCCAGGTGCAAAGGATTTTATTCAAGTGGAGATTGTAGTTGAGAAGAATTCACAAAAGATTATTCTCATTGGAAAAGAGGGAAAGGGCTCTAAAACTACTAGCAACTGCTGCACGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46890.p1 GENE.S_Transcript_46890~~S_Transcript_46890.p1 ORF type:complete len:379 (+),score=83.24,MMR_HSR1|PF01926.19|1.2e-22,FeoB_N|PF02421.14|3.1e-11,DUF258|PF03193.12|0.00017,DUF258|PF03193.12|0.0055,DUF258|PF03193.12|3e+03,ATP_bind_1|PF03029.13|3.2e+02,ATP_bind_1|PF03029.13|8.7e-06,Dynamin_N|PF00350.19|0.00075,Dynamin_N|PF00350.19|5.1 S_Transcript_46890:176-1312(+)
MELIAVRIPSIGDRFFSHNSTLTSLSPSPSQRISWCSPLLHFNVRSRVRNRGAGILQEEREPSNFKSYDSHYYSSDGEQEEDSSSSSSFLSLSEKPDRNMALLDDYELEENDFDPNSNHRSGYVAVLGKSNVGKSTLLNQMIGQKLSIVTDKPQTTRHRILGICSGPDYQMILYDTPGVIEKKMHKLDSMMMKNVRSATINADCVVVVVDVCKMPVKIDEVLEEGIGNLTDKLPTLLVLNKKDLIKPGETAKKLQWYEKFTDVDEVVPVSAKYGHGVDDVKEWILSKLPTGPPYYPKDIASEHPERFFVAEIVREKIFMQYKNEVPYACQVNVVSYKSRPGAKDFIQVEIVVEKNSQKIILIGKEGKGSKTTSNCCTP*

Click here to download the sequence:
Link to NCBI Protein BLAST