Transcript Information: S_Transcript_46901.p1


Annotated TAIR IDAT5G19540.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6595748-6597724 | Forward length=462
E-Value4.2E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 140.698962139994
Replicate 246.756497535068
Replicate 350.698232664961
Condition 2: 8 Hour
Replicate 155.811847880195
Replicate 256.491257966841
Replicate 361.22731958502
Condition 3: 24 Hour
Replicate 151.641670176509
Replicate 252.392284083397
Replicate 351.815999175364


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46901.p1 GENE.S_Transcript_46901~~S_Transcript_46901.p1 ORF type:complete len:478 (+),score=102.43 S_Transcript_46901:163-1596(+)
ATGGTAGCTCACTCTCTCTCCATTCTCTCTCCTATTCCTTCAACCTCATCTTCTCCTTCTTCTACTTCCACCTCCTCAGATTCTCTCCGCTCCCCTTACACCCTTCGCTTCTCCGATTTCTCTCTCCGAAACCCTAACCCTAACCCTAACCCTAGGCCGCTCAAACGCCCTCACACTCTGTCTCCTCCTCCTCGAGTTTCGAGCTTCTTCGGAGCATCATCGTCGCCGGAAAATGACGACGAATCGACGGCGACAACGGCGCCGGAGCAGTTTCTGGAGAACAATTCGATCGCCGATTTCATGAGGTACAAGAAAGGGGCCAATGATGGTGAGTTGCAAACCGCTGTTGTCAGTTACCGTAAGAAGTTCCCTTGGTCTCTTCTCCAGCCTTTCCTCAAGGTTGATTTGGTCTCTACCATTCACATTGCTGATAAAGAATACTTTGCAACCTTGCAGAAGGAACTTGAACCCTATGATTGTGTTCTTTATGAGATGGTAGCAAGCAGAGAGAGTTTAGACAATCGAAGAAGAGCAGCAGCTAAAAAGAGGCTCAAATCTTCACGATCGCGGGGTTTTAACATTATTGGATTTATCCAGAGACAGATGGCTCGGATACTTACTCTTGATTTCCAGTTGGACTCTCTTGATTACCAGGCTGAGAATTGGTATCATGCTGACTTGGATTTTGAGACCTTCAAAATGCTTCAGATAGAAAGAGGTGAGAATTTCTTCACATTTGCAAGAGATATGACTATTAAATCAACAAAAGCCATGGTGCAGCCCACAATTCCTGAAAATCTTGATCCTTGGAGATCCAAGCTTTTGTGGGCTTCTCGCGTGCTCCCTATGCCACTTGTGGGCCTTCTCATTATTGGAGGCATTTGTACTGATGTTGGAGGTCAGGTCTTTGAATACCCTGAGCTGGATGCTCTGTCCAGGCTTGATTTTGGTGCTGCAATGAAGGTTTTCCTGGCAAAGCGCCTGACATCAGAGTTCACACAAGTGACAGCAGATGTGGAGGCAAATTCGGTGATCATTGGTGAGAGAAACAAGGCAGCAACAGAAGCACTTAGAAGAGCCATTGATGAAGGCCACAACAGAATTGCCATTCTCTATGGAGGTGGGCACATGCCGGATCTAGGGAGACGATTGAGGGAGGATTTTGACCTGGTCCCATCTCAAGTTCAATGGATAACTGCCTGGTCCATCAGGAAACGGGATTTGAAGAGCAGCTCATTTCCATTTCTGAAGACTATGGCAAAAATCTCTGGCTGGCCCTTGAATTGGTACCAAACCTTGGCGCTTCTTATCTTTTCCTTGGTCCTTGCAGTAGATCTTTGGTTTTGGGAGTTGTTCTTTGGAACAACAGTTGATTGGGTGTCACAAATTGCGTCAGACGCTTCCCAGTATATCGGCAATGGACCGGCTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46901.p1 GENE.S_Transcript_46901~~S_Transcript_46901.p1 ORF type:complete len:478 (+),score=102.43 S_Transcript_46901:163-1596(+)
MVAHSLSILSPIPSTSSSPSSTSTSSDSLRSPYTLRFSDFSLRNPNPNPNPRPLKRPHTLSPPPRVSSFFGASSSPENDDESTATTAPEQFLENNSIADFMRYKKGANDGELQTAVVSYRKKFPWSLLQPFLKVDLVSTIHIADKEYFATLQKELEPYDCVLYEMVASRESLDNRRRAAAKKRLKSSRSRGFNIIGFIQRQMARILTLDFQLDSLDYQAENWYHADLDFETFKMLQIERGENFFTFARDMTIKSTKAMVQPTIPENLDPWRSKLLWASRVLPMPLVGLLIIGGICTDVGGQVFEYPELDALSRLDFGAAMKVFLAKRLTSEFTQVTADVEANSVIIGERNKAATEALRRAIDEGHNRIAILYGGGHMPDLGRRLREDFDLVPSQVQWITAWSIRKRDLKSSSFPFLKTMAKISGWPLNWYQTLALLIFSLVLAVDLWFWELFFGTTVDWVSQIASDASQYIGNGPAM*

Click here to download the sequence:
Link to NCBI Protein BLAST