Transcript Information: S_Transcript_46977.p1


Annotated TAIR IDAT3G51130.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18994219-18997180 | Forward length=410
E-Value8.4E-256
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.828168571427
Replicate 214.601164865314
Replicate 315.840111526791
Condition 2: 8 Hour
Replicate 126.202730195017
Replicate 223.025041300741
Replicate 323.442246027863
Condition 3: 24 Hour
Replicate 114.882159069018
Replicate 212.02119446142
Replicate 314.053158561488


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46977.p1 GENE.S_Transcript_46977~~S_Transcript_46977.p1 ORF type:complete len:411 (+),score=61.13,UPF0183|PF03676.10|1.8e-136 S_Transcript_46977:204-1436(+)
ATGTTGCATCATCATCATCAACAACAACAGCAAAGAGCAAGGCGCCGTTGTGAAGGCACTGCTATGGGAGCCATTGTTCTCGATCTTCGTCCCGGTCTCGGCATCGGCCTGTTCACCCTCGGAATGCCGATATGCGAAGCCTTTGCTCAAATTGAACAACAACCTAATATTTATGATGTTGTGCACGTCAAGTATTTTGATGAGGAGCCCTTAAGATTGGACATTGTCATTAGCTTTCCTGATCATGGGTTTCATCTCCGATTTGATCCTTGGTCTCAGAGACTGCGCCTTATTGAAATTTTTGATGTTAAAAGGCTTCAGATGCGGTACGCGACCGCGCTGATTGGAGGACCAACTACTCTTGCTACTTTTGTCGCTGTATATCAGCTTTTTGGACCAACTTATCCAGGGACTTATGACAAAGATAGAGGTGTTTATACTTTGTTTTATCCGGGATTATCCTTTGCTTTTCCTATCCCGGCCCAGTATACAGATTGCTGCAATGACAGAGAAGCGGAGTTACCACTCGAATTTCCTGATGGTACTACGCCTGTCACTTGCCGTGTCTGCATATATGATAGTTCTATGGGAAAGAAGGTAGGAGTTGGATCATTAATGGACAAGGCTGTTGTCCCTGCACCACCTGCTGGTAGCCTCTACATGGAAGAGGTGCATGTTAAGCTGGGAGAGGAATTATGGTTTTCAATTGGTGGACAGCATATACCATTTGGGGCATCACCACAGGATGTTTGGACTGAATTGGGCCGGCCATGTGGGATACATCAAAAGCAGGTTGACCAAATGGTCATTCACTCAGCCTCTGATCCACGTCCACGAACAACTCTCTGTGGAGATTACTTCTACAATTACTTCACTCGTGGCTTGGACATATTATTTGATCGACAGACGCACAAAATCAAGAAATTTGTTCTCCATACAAACTATCCTGGGCATCCTGACTTCAACTCATATATAAAGTGTAATTTTGTCATCCATTGTTCTGAATTTGAAGACTCATTCTCAGATGTAAGCACTGCAAAGCAGTGCATTACCCCAAGCACCAAATGGGAGCAGGTGAAGGAAATCCTTGGGGATTGTGGCCGGGCTGCTATCCAAACTCAAGGTTCCACAAATAATCCTTTTGGATCTACTTTTGTTTATGGTTATCAAAATGTTGCATTTGAGGTCATGAAGAATGGTTATATTGCCACTATGACTCTGTTTCAGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46977.p1 GENE.S_Transcript_46977~~S_Transcript_46977.p1 ORF type:complete len:411 (+),score=61.13,UPF0183|PF03676.10|1.8e-136 S_Transcript_46977:204-1436(+)
MLHHHHQQQQQRARRRCEGTAMGAIVLDLRPGLGIGLFTLGMPICEAFAQIEQQPNIYDVVHVKYFDEEPLRLDIVISFPDHGFHLRFDPWSQRLRLIEIFDVKRLQMRYATALIGGPTTLATFVAVYQLFGPTYPGTYDKDRGVYTLFYPGLSFAFPIPAQYTDCCNDREAELPLEFPDGTTPVTCRVCIYDSSMGKKVGVGSLMDKAVVPAPPAGSLYMEEVHVKLGEELWFSIGGQHIPFGASPQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDRQTHKIKKFVLHTNYPGHPDFNSYIKCNFVIHCSEFEDSFSDVSTAKQCITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVMKNGYIATMTLFQS*

Click here to download the sequence:
Link to NCBI Protein BLAST