Transcript Information: S_Transcript_46980.p1


Annotated TAIR IDAT3G51130.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18994219-18997180 | Forward length=410
E-Value8.1E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.136962473418
Replicate 214.628588728352
Replicate 38.7202067351807
Condition 2: 8 Hour
Replicate 110.08320085647
Replicate 217.994747818911
Replicate 312.511475768141
Condition 3: 24 Hour
Replicate 112.228385867017
Replicate 211.208732899172
Replicate 312.473945874269


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_46980.p1 GENE.S_Transcript_46980~~S_Transcript_46980.p1 ORF type:5prime_partial len:184 (+),score=24.73,UPF0183|PF03676.10|3.5e-68 S_Transcript_46980:3-554(+)
TTTTTGGTACTGTTGCTTTTGTCTAATTGGGTGCATGTATTCGTGGATTTACTTATTTTGCAGGATGTTTGGACTGAATTGGGCCGGCCATGTGGGATACATCAAAAGCAGGTTGACCAAATGGTCATTCACTCAGCCTCTGATCCACGTCCACGAACAACTCTCTGTGGAGATTACTTCTACAATTACTTCACTCGTGGCTTGGACATATTATTTGATCGACAGACGCACAAAATCAAGAAATTTGTTCTCCATACAAACTATCCTGGGCATCCTGACTTCAACTCATATATAAAGTGTAATTTTGTCATCCATTGTTCTGAATTTGAAGACTCATTCTCAGATGTAAGCACTGCAAAGCAGTGCATTACCCCAAGCACCAAATGGGAGCAGGTGAAGGAAATCCTTGGGGATTGTGGCCGGGCTGCTATCCAAACTCAAGGTTCCACAAATAATCCTTTTGGATCTACTTTTGTTTATGGTTATCAAAATGTTGCATTTGAGGTCATGAAGAATGGTTATATTGCCACTATGACTCTGTTTCAGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_46980.p1 GENE.S_Transcript_46980~~S_Transcript_46980.p1 ORF type:5prime_partial len:184 (+),score=24.73,UPF0183|PF03676.10|3.5e-68 S_Transcript_46980:3-554(+)
FLVLLLLSNWVHVFVDLLILQDVWTELGRPCGIHQKQVDQMVIHSASDPRPRTTLCGDYFYNYFTRGLDILFDRQTHKIKKFVLHTNYPGHPDFNSYIKCNFVIHCSEFEDSFSDVSTAKQCITPSTKWEQVKEILGDCGRAAIQTQGSTNNPFGSTFVYGYQNVAFEVMKNGYIATMTLFQS*

Click here to download the sequence:
Link to NCBI Protein BLAST