Transcript Information: S_Transcript_470243.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value2.3E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25047530574288
Replicate 20.13843318938048
Replicate 30.13018401941365
Condition 2: 8 Hour
Replicate 10.11708057429014
Replicate 20.17546547952727
Replicate 30.16718311847044
Condition 3: 24 Hour
Replicate 10.10279945172044
Replicate 20.19553092340378
Replicate 30.15825596489485


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_470243.p1 GENE.S_Transcript_470243~~S_Transcript_470243.p1 ORF type:complete len:1275 (+),score=170.06,RVT_1|PF00078.23|5.6e-43,zf-RVT|PF13966.2|7.1e-19,RVT_3|PF13456.2|1.4e+03,RVT_3|PF13456.2|4.7e+03,RVT_3|PF13456.2|5.3e-16 S_Transcript_470243:225-3827(+)
ATGGATGGTTTTCGTGGAGCCATGGATGCTTGTGGTCTACGTGATCTGGGCTACTCGGGAAACAAGTTCACCTGGAAGCGTGGGAGAGTCAAAGAACGCCTTGATAGGTACCTTGGAAATGGACTTTGGATCTCAAAATTTCCTAGATGGGAGATACAACACATGGTACGCATATGTTCCGACCACTCCCCCATCATGTTATCTGCTCTTACCTCGGCTGAACCCACTACCAAAAAATATGGAAGCTTCAAGTTCGAGCCGTTCTGGCTAGGGAGTGCGGAATGTGAGCAGATTGTGAGAGCTGGATGGGGCCGTGGTGGGACTGACCCGGCTCAAAAAATAGCAGGGTGTACGGCGGAATTAAAAGCCTGGGCAAGACGTAATCTTGGAGATAGAAAAAAGAAGATTAATGAAGCTGAAGGTGAGCTAGCTAGTCTCCAAACAGCCCCACCCTCGGCTGATGTCTTGGGGAGATGCAAAGAGCTATATGACCAGATTAATAGACTTCACAGGGAAGAGGAGTCTTACTGGCATATTAGAGCAAGGACAAATGAACTGCGGGATGGGGACAAAAACACCACTTATTTCCACCACAAGGCAAGTCAAAGACGACGAAGGAACCACATCAAGGGCCTCATGGACGAGAATGGCACATGGCACACTTCCGAGGAAGGTATTGCATCAGTTGTCACCTCTTATTACAAACAATTGTTTACTGCCTCAGGGTCCCGAGATGCCTTTTTGGTCGCGGCAGGCATAAGGCGCCAAATCACTCAAGACATGAACTCCAAATTAGAAGAAGAACCTACTCATGATGAGATCCTCAAGGCTCTAAGGCAAATGCACCCAAAGAAGGCACCCGGCCCGGATGGTATGCATGCTCTCTTCTTCCAAAAATTTTGGCATATTATTGGTGTGGATGTAGTGAATTTCATTAAAAGATGGTGGAGGGGAAATGCTGACTTAAGTCATATCAACTCTACCAATATTGTTTTGATCCCGAAAACAAAAACCCCCCAGCGTATGACCGAATTTCGCCCTATAAGTCTCTGTAATGTTCTTTATAAAATTATCTCAAAGACTCTTGCTAATAGGCTAAAAGAACTCCTTCCCTCCATTGTTTCGGAAAACCAAAGTGCTTTTATCTCTGGGAGATTGATCACAGACAACGCTTTGGTGGCTTTTGAAATCTTTCACTCTATGAAACACAAAAGAGGGCGAAAGGGGACTATGGCTTTGAAGCTGGACATGAGTAAAGCCTATGATAGAATAGAATGGGCTTTCCTGGAGGAGGTGATGAGGAGATTTGGTTTTGGGAGTGCATGGATTGACCGGATAATGCATTGCCTTCGCAGTGTGTCCTTTTCTTGTGTCATAAATGGCCAAAGAATAGGTGAGATTATTCCTACTAGGGGACTCCGTCAGGGGGACCCGATATCACCTTACCTCTTTATTTTATGTGCAGATGCTTTTTCGACTTTAATTGATGTGGCGGTAAAGCAAAAGGAGATACACGGGGCTTGTGTGTGTAGGGGTGCCCCTGAAATTTCTCACCTATTTTTTGCCGATGACAGCATTTTATTCTCACGAGCTAATACCCAAGAATGCACTAAGATTGCGAAGATCATTGAGCTCTATGAAAATGCCTCGGGACAAAAAGTCAACTTCGAGAAAACCGAAGTGGCCTTTAGTTCTAATGTAGCGGAGGATACCCGGAACGAGATCAAGAGGCTCTTGAATGTTCGGGAAGTAGCGAAACATGAGAAGTACTTGGGGCTGCCTACTGTGATTGGGAGATCAAAAAAAGCCGTGTTTGCAGGGCTAAAGGAGAGGATATGGAAGAAAATACAGGGTTGGAAGGAGAGACTCCTCTCCAAACCGGGTAAAGAAATCCTCATCAAATCCATTGTGCAAGCTATCCCAACGTACATTATGAGCTTATTCAAGATACCTGATAGTCTCTGTGAGGAAATTCATAGTCTCATGGCCAAATTTTGGTGGGGGAGTTCAGATGAGAAGCGTAAAATGCATTGGCAAAAGTGGGACAGCCTATGCATGCCTAAGTCCCATGGGGGTATGGGCTTCAGGGATCTCAAGGTTTTTAACCAAGCTCTGTTAGCCAAACAAGCTTGGCGCTTGACCCGACAAACCCACACCCTGCTCTACAAGGTCCTCAAGGCGCGCTATTTCAAAAATTCGGATTTTATGGGATCTTATTTGGGGGCAAACCCAAGTTTTACATGGCGGAGTGTATGGAGCTCAAAATCTCTCCTGATGGAGGGTTTAAAATGGCGTGTGGGCAATGGGGAAGACATTAATGTCTGGACAGAGGCCTGGCTCCCTGGTAACTCGGCTTCAAGAGTCCCTACACCACTGGCGAATAGCAACATGAGTCTCAGGGTGTGCGATTTGATGGACAAACAAAATAGATGCTGGAAGGTCCCACTCATCAATGAGTGCTTTTTGCCTGAGGATAGAATACGAATCTATGATATTAAAATTAGTGAAAGGTTGCCATCTGATGCCCGATACTGGTGGCCGACAAAAAATGGCTATTATACTGTCAAGTCAGGATATTGGATGGGCAAACTTGGCCATCGCAGTAATGCTCAAACACCAGAGGACGACAAGCTTTTTTGGAAGAAAATGTGGAACATCAAAGCCCCACCAAAATTAAAGCATTTTATTTGGAGAGCATGCACAAACTCCTTGGCAGTAACTGCCAACCTTGCACGACGCCATGTGCTGGAGCATGGGGAATGCCGAATTTGCTCGGTGGAAAGTGAGACAATAAATCATGCCATTTTCCACTGCTCATTGTCCCAACATCTTTGGTCCCATGATGATTTTTTAATGCTCCTCCTGGATATACCCACCGAGACGTTCTTTGAGTGCATGAAGTGGTGCCAACTCAAGCTCTCGGGAGACGACTTTGTTAAATTTTCCACAATTGCTTGGGCTGCTTGGCACTGCCGTAACAAGCACCTCTATGAAAATGTAAGACTAGAAGGAGTGAAAGTAAAGGAGGGGTTTATTAAAATGGTGCAGGATTATGTGTCTTATAACAATGCTACAAATATATGCCCAGGTCCCCAGCCTGTTTCTGAGTCCTCTGAGGACTGGAAGCCTCCAGAGGAAGGCTTTGTGAAAATTAATTGTGACGCGGCTATGCTGGGACCAGGCCTTGTAGGACTGGGGTGTGTGTTTCGCAACCATAATGGGCATATCTTGTGTCTGGGCGCAAAAAGGCTGGAGGTGAACTGGGATGTTAGCATGGCAGAGGCAGCGGCGGCTCAATTTGGTTTGCAGATCGCGCTGGGACTAGAACTAACTCATATTATGGTGGAGACGGACTCCCTGGGCACAGCAAGAAGCCTGAAGAAAATGCAAACAGATCTCTCCCCCCTTGGCCAACTGTATGAAGACATTTCTCATCTCGGCTCCTCTTTTGTTAGTTGTTGTTTTAATCATGTCAAAAGGGTTGGTAACATTGTCGCTCATCTTATGGCAAGATTTCCACCACCCGACAATAGAGAGTTTGTAACTGTGAACAACTTCCCGCAGAGTATTTTAGCTCTGGCGAGCCTTGATTATGTTATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_470243.p1 GENE.S_Transcript_470243~~S_Transcript_470243.p1 ORF type:complete len:1275 (+),score=170.06,RVT_1|PF00078.23|5.6e-43,zf-RVT|PF13966.2|7.1e-19,RVT_3|PF13456.2|1.4e+03,RVT_3|PF13456.2|4.7e+03,RVT_3|PF13456.2|5.3e-16 S_Transcript_470243:225-3827(+)
MDGFRGAMDACGLRDLGYSGNKFTWKRGRVKERLDRYLGNGLWISKFPRWEIQHMVRICSDHSPIMLSALTSAEPTTKKYGSFKFEPFWLGSAECEQIVRAGWGRGGTDPAQKIAGCTAELKAWARRNLGDRKKKINEAEGELASLQTAPPSADVLGRCKELYDQINRLHREEESYWHIRARTNELRDGDKNTTYFHHKASQRRRRNHIKGLMDENGTWHTSEEGIASVVTSYYKQLFTASGSRDAFLVAAGIRRQITQDMNSKLEEEPTHDEILKALRQMHPKKAPGPDGMHALFFQKFWHIIGVDVVNFIKRWWRGNADLSHINSTNIVLIPKTKTPQRMTEFRPISLCNVLYKIISKTLANRLKELLPSIVSENQSAFISGRLITDNALVAFEIFHSMKHKRGRKGTMALKLDMSKAYDRIEWAFLEEVMRRFGFGSAWIDRIMHCLRSVSFSCVINGQRIGEIIPTRGLRQGDPISPYLFILCADAFSTLIDVAVKQKEIHGACVCRGAPEISHLFFADDSILFSRANTQECTKIAKIIELYENASGQKVNFEKTEVAFSSNVAEDTRNEIKRLLNVREVAKHEKYLGLPTVIGRSKKAVFAGLKERIWKKIQGWKERLLSKPGKEILIKSIVQAIPTYIMSLFKIPDSLCEEIHSLMAKFWWGSSDEKRKMHWQKWDSLCMPKSHGGMGFRDLKVFNQALLAKQAWRLTRQTHTLLYKVLKARYFKNSDFMGSYLGANPSFTWRSVWSSKSLLMEGLKWRVGNGEDINVWTEAWLPGNSASRVPTPLANSNMSLRVCDLMDKQNRCWKVPLINECFLPEDRIRIYDIKISERLPSDARYWWPTKNGYYTVKSGYWMGKLGHRSNAQTPEDDKLFWKKMWNIKAPPKLKHFIWRACTNSLAVTANLARRHVLEHGECRICSVESETINHAIFHCSLSQHLWSHDDFLMLLLDIPTETFFECMKWCQLKLSGDDFVKFSTIAWAAWHCRNKHLYENVRLEGVKVKEGFIKMVQDYVSYNNATNICPGPQPVSESSEDWKPPEEGFVKINCDAAMLGPGLVGLGCVFRNHNGHILCLGAKRLEVNWDVSMAEAAAAQFGLQIALGLELTHIMVETDSLGTARSLKKMQTDLSPLGQLYEDISHLGSSFVSCCFNHVKRVGNIVAHLMARFPPPDNREFVTVNNFPQSILALASLDYVI*

Click here to download the sequence:
Link to NCBI Protein BLAST