Transcript Information: S_Transcript_47029.p1


Annotated TAIR IDAT3G01150.1
Annotated Gene Namepolypyrimidine tract-binding protein 1
Annotated Gene Symbol(s)PTB, ATPTB1, PTB1
Annotation TypeOrtholog
Chromosome Positionchr3:51732-54344 | Forward length=399
E-Value1.1E-179
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5176390985646
Replicate 26.8775979793488
Replicate 37.1152531186731
Condition 2: 8 Hour
Replicate 19.8728658875616
Replicate 28.0787231199013
Replicate 37.3026514942992
Condition 3: 24 Hour
Replicate 15.596065832467
Replicate 25.9457530370047
Replicate 37.628889974387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47029.p1 GENE.S_Transcript_47029~~S_Transcript_47029.p1 ORF type:complete len:324 (+),score=57.02,RRM_1|PF00076.18|3.1e-09,RRM_1|PF00076.18|0.00027,RRM_1|PF00076.18|0.0051,RRM_5|PF13893.2|2.4e-05,RRM_5|PF13893.2|4.5e+03,RRM_5|PF13893.2|0.016,RRM_5|PF13893.2|0.0049,RRM_6|PF14259.2|3.6e-07,RRM_6|PF14259.2|0.022,RRM_6|PF14259.2|0.22 S_Transcript_47029:340-1311(+)
ATGTCAACATCAGGGCAACAGCAATTCAGGTACACACAAACACCATCGAAGGTCCTTCATTTAAGGAACCTGCCTTGGGAGTGCTCTGAAGAGGAGCTTATCGAGCTTTGCAAACCCTTCGGTAAGATCGTTAACACCAAGTGCAATGTCGGCGCCAATCGTAATCAGGCCTTCGTCGAATTCGCAGATCTTAACCAGGCCATCTCAATGGTTTCATATTATGCCTCTTCTTCAGAGCCTGCGCAAGTTCGAGGGAAAACTGTGTACATTCAATATTCAAACAGACATGAAATTGTGAACAATAAGAGTCCTGGTGACACTCCAGGAAATGTCTTGCTGGTTACTATGGAGGATGTGCAACCTGGTGATGTAACCATTGAAGTCATTCACTTGGTTTTCTCTGCCTTTGGGTTTGTCCACAAAATTGCCACTTTTGAGAAGGCTGCTGGATTTCAGGCATTAATTCAATTCAGTGATGTAGAGACTGCAAGTGCAGCAAAGAATGCGTTGGATGGAAGAAGCATACCTAGGTATTTACTTCTGGAGCATGTGACTTCATGCCACCTGCGGATCTCATATTCTGCACATACTGACCTTAATATTAAGTTCCAATCTCACAGGAGCAGGGACTATACCAATCCATATCTTCCTGTGAACCCTACTGCATTTGAGGGTTTCGTCCAGCCTGTGCTAGGTACTGATGGGATAAAAAAGGAACAGGAGAGCAATGTGCTTCTTGCTGCAATTGAGAATATGCAATATGCAGTGACACCTGATGTCCTTCATACGGTATTTTCTGCATTTGGCACAGTGCAAAAAATTGCTATATTTGAGAAAAATGGCCAGACACAGGCGCTGATTCAGTATCCTGGAAAGAGAACCATCAAGCAGTTTCTGTTTGGCTTTCACTTGGAGCAAAATTTTACATGTTCGAAAAACTCTTTTAGTATTGACAGGAGGGGACAGCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47029.p1 GENE.S_Transcript_47029~~S_Transcript_47029.p1 ORF type:complete len:324 (+),score=57.02,RRM_1|PF00076.18|3.1e-09,RRM_1|PF00076.18|0.00027,RRM_1|PF00076.18|0.0051,RRM_5|PF13893.2|2.4e-05,RRM_5|PF13893.2|4.5e+03,RRM_5|PF13893.2|0.016,RRM_5|PF13893.2|0.0049,RRM_6|PF14259.2|3.6e-07,RRM_6|PF14259.2|0.022,RRM_6|PF14259.2|0.22 S_Transcript_47029:340-1311(+)
MSTSGQQQFRYTQTPSKVLHLRNLPWECSEEELIELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTMEDVQPGDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDVETASAAKNALDGRSIPRYLLLEHVTSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAFEGFVQPVLGTDGIKKEQESNVLLAAIENMQYAVTPDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPGKRTIKQFLFGFHLEQNFTCSKNSFSIDRRGQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST