Transcript Information: S_Transcript_47030.p1


Annotated TAIR IDAT3G01150.1
Annotated Gene Namepolypyrimidine tract-binding protein 1
Annotated Gene Symbol(s)PTB, ATPTB1, PTB1
Annotation TypeOrtholog
Chromosome Positionchr3:51732-54344 | Forward length=399
E-Value3.4E-219
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.3498241026
Replicate 212.881977345128
Replicate 39.603080444402
Condition 2: 8 Hour
Replicate 19.4779512520591
Replicate 28.627052743424
Replicate 39.9845473530958
Condition 3: 24 Hour
Replicate 112.183638722423
Replicate 212.936641901967
Replicate 312.913247135517


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47030.p1 GENE.S_Transcript_47030~~S_Transcript_47030.p1 ORF type:complete len:459 (+),score=84.92,RRM_1|PF00076.18|5.1e-09,RRM_1|PF00076.18|0.00046,RRM_1|PF00076.18|0.0001,RRM_5|PF13893.2|4.1e-05,RRM_5|PF13893.2|6.8e+03,RRM_5|PF13893.2|0.026,RRM_5|PF13893.2|1.8e-05,RRM_6|PF14259.2|6.3e-07,RRM_6|PF14259.2|0.036,RRM_6|PF14259.2|0.028 S_Transcript_47030:348-1724(+)
ATGTCAACATCAGGGCAACAGCAATTCAGGTACACACAAACACCATCGAAGGTCCTTCATTTAAGGAACCTGCCTTGGGAGTGCTCTGAAGAGGAGCTTATCGAGCTTTGCAAACCCTTCGGTAAGATCGTTAACACCAAGTGCAATGTCGGCGCCAATCGTAATCAGGCCTTCGTCGAATTCGCAGATCTTAACCAGGCCATCTCAATGGTTTCATATTATGCCTCTTCTTCAGAGCCTGCGCAAGTTCGAGGGAAAACTGTGTACATTCAATATTCAAACAGACATGAAATTGTGAACAATAAGAGTCCTGGTGACACTCCAGGAAATGTCTTGCTGGTTACTATGGAGGATGTGCAACCTGGTGATGTAACCATTGAAGTCATTCACTTGGTTTTCTCTGCCTTTGGGTTTGTCCACAAAATTGCCACTTTTGAGAAGGCTGCTGGATTTCAGGCATTAATTCAATTCAGTGATGTAGAGACTGCAAGTGCAGCAAAGAATGCGTTGGATGGAAGAAGCATACCTAGGTATTTACTTCTGGAGCATGTGACTTCATGCCACCTGCGGATCTCATATTCTGCACATACTGACCTTAATATTAAGTTCCAATCTCACAGGAGCAGGGACTATACCAATCCATATCTTCCTGTGAACCCTACTGCATTTGAGGGTTTCGTCCAGCCTGTGCTAGGTACTGATGGGATAAAAAAGGAACAGGAGAGCAATGTGCTTCTTGCTGCAATTGAGAATATGCAATATGCAGTGACACCTGATGTCCTTCATACGGTATTTTCTGCATTTGGCACAGTGCAAAAAATTGCTATATTTGAGAAAAATGGCCAGACACAGGCGCTGATCCAGTATCCTGATGTCACAACTGCTTCTGTTTCAAAAGATGCTTTGGAAGGACACAGCATATATGATGGTGGCTACTGTAAGCTTCATCTAACATACTCTCGTCATACTGATCTCAATGTAAAGGCTCACAGTGATAAAAGTAGAGATTACACGATTCCAGACTCTGGGATGCTGCCTGGGCAACAGACTTCAAGCTACCCAACAGCTCCTGCCACGCCCTGGCAGAACCCTCAAGCAGCAGCAGGATATCCGCCAAGTGGATATGGTACTGCTGCTCCCATGGGACCCCAGAATCAAGTTCCCTCATGGGACCCGTCTTTGCAGGCTGGACGGCAAACATTCGTCTCAGTTCCGAGCACATTTCCAGGCCAGACATTTGCACTGTCCCCAGGTGTTGCATATGTGTCTGCACCAGTTTCACCAGCACAGGCAGTTTCCTCTCCTTTGGTACAGAGCAGCCATGTTCACCCCCCTGGTGCTGCGTCACCTGCTGGTCAGGCTGCTTATTACCGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47030.p1 GENE.S_Transcript_47030~~S_Transcript_47030.p1 ORF type:complete len:459 (+),score=84.92,RRM_1|PF00076.18|5.1e-09,RRM_1|PF00076.18|0.00046,RRM_1|PF00076.18|0.0001,RRM_5|PF13893.2|4.1e-05,RRM_5|PF13893.2|6.8e+03,RRM_5|PF13893.2|0.026,RRM_5|PF13893.2|1.8e-05,RRM_6|PF14259.2|6.3e-07,RRM_6|PF14259.2|0.036,RRM_6|PF14259.2|0.028 S_Transcript_47030:348-1724(+)
MSTSGQQQFRYTQTPSKVLHLRNLPWECSEEELIELCKPFGKIVNTKCNVGANRNQAFVEFADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTMEDVQPGDVTIEVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDVETASAAKNALDGRSIPRYLLLEHVTSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAFEGFVQPVLGTDGIKKEQESNVLLAAIENMQYAVTPDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVTTASVSKDALEGHSIYDGGYCKLHLTYSRHTDLNVKAHSDKSRDYTIPDSGMLPGQQTSSYPTAPATPWQNPQAAAGYPPSGYGTAAPMGPQNQVPSWDPSLQAGRQTFVSVPSTFPGQTFALSPGVAYVSAPVSPAQAVSSPLVQSSHVHPPGAASPAGQAAYYR*

Click here to download the sequence:
Link to NCBI Protein BLAST