Transcript Information: S_Transcript_470339.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.7676827279379
Replicate 20
Replicate 30.17733400080385
Condition 2: 8 Hour
Replicate 10.41010365994486
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.42009391328066
Replicate 20
Replicate 30.7275589732245


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_470339.p2 GENE.S_Transcript_470339~~S_Transcript_470339.p2 ORF type:5prime_partial len:104 (+),score=19.69,RVT_1|PF00078.23|1.9e-17 S_Transcript_470339:1-312(+)
CGGAGGTCGGGTTTCGAGGGGGTGGTCTTCAAGTTGGATTTTGAGAAGGCGTATGATAGAGTTAGCTGGTCTTTCCTTAACCGGGTGCTCCAACGGAAGGCGAGGTGGAGGCATTGGGTGAAGGGGTGCCTTTCTAATGCTGCTTTCTCTGTCTTGGTTAATGGTGCCCCAAGGGAGTGGTTCTCTTCTTCCCGGGGGCTACACCAAGGGGACCCCCTATCCCCTTTTCTTTTTACTTTGGTGGTTGATGTGCTAGGCAGGTTGTTGGAGAGAGCAGTGGATATAGAGGGGTGGTGGAGGGCTTTGCTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_470339.p2 GENE.S_Transcript_470339~~S_Transcript_470339.p2 ORF type:5prime_partial len:104 (+),score=19.69,RVT_1|PF00078.23|1.9e-17 S_Transcript_470339:1-312(+)
RRSGFEGVVFKLDFEKAYDRVSWSFLNRVLQRKARWRHWVKGCLSNAAFSVLVNGAPREWFSSSRGLHQGDPLSPFLFTLVVDVLGRLLERAVDIEGWWRALL*

Click here to download the sequence:
Link to NCBI Protein BLAST