Transcript Information: S_Transcript_470407.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value8E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12981951822039
Replicate 20.10762336369519
Replicate 30.089964566261466
Condition 2: 8 Hour
Replicate 10.10402629422992
Replicate 20.072753979316184
Replicate 30.38125906285333
Condition 3: 24 Hour
Replicate 10.035520135757064
Replicate 20.073703452280805
Replicate 30.20505727158631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_470407.p1 GENE.S_Transcript_470407~~S_Transcript_470407.p1 ORF type:internal len:615 (+),score=59.97,RVT_1|PF00078.23|8.9e-42 S_Transcript_470407:2-1843(+)
AAGCCTATAGTGCCCTTCCTTAAGGACTTTGCCTCCCAGCTTCAAGACTGGAATCAGAATGTATTTGGAAATATTTATAGGAAGAAGAAAATATTGTGGGCAAGATTGTCTGGCATTCAGCGCTGCCTTGCAGAAAGTGGGAACCGGTACCTGTTTAAAAAAGAAGCACAACTTAGACGAGAATTGGATGAAGTTCTTGATCAAGAGGCGACTCTCTGGTACCAGAAATCTAGACAAGAGGCGATTCGGGATGGGGATCGCAATACTACCTTCTTCCACACTTTAACCATCATTCGAAGAAGGAGGAATAGAGTGGAGGCACTTCGCAACAACACTAATGAGTGGATCACCAACTCGGGGGAACTTAAAACCATGATGCTGAATTACTTCCAGGGTCTTTATTGTGAACAAGGGGGGTCTAAGGAGGGCGAACTCCCCTCTGACTTCTTTCCTCCACTCACGGCAGGTATGTGTGAGAAACTGAACAGGCCATTCACAGTGTCTGATATTCGTGCAGTGGTGGAATCCATGCATCCCTACAAAGCGCCTGGTCCAGATGGATTCCAAGCAATATTCTTCCAAAAAAAATGGGATGTGGTGGGCGAAAGTTTATGTGATACAGTGCTCAGAGTGCTGCAAGGCAAAATTTTCCCTGAGGGGCTCAATGAGACCTTTGTAGTTTTAATACCAAAAGTGGATACTCCGGAACGAGTCTCGCAATTCCGTCCGATAAGCCTATGTAACGTAGTCTACAAAGTCATCACGAAAGCCATTGTGAACAGACTCAAGCCATTGCTCCCCCACATGATATCCCCTACTCAAGGGGCCTTTGTCCCAGGACGGCAGATTACTGATAATATCATCATTGTGCAAGAAGCTATTCACACCATGAGACGTAAGAAGGGTGCTACGGGTTTTATGGCAATCAAGATAGACCTTGAAAAGGCCTACGACAGATTGCGCTGGGAGTTTATTAAGGATACGCTCCAAGAAATGCAAATTCCAATCCTCCTCCGGGAAGTGATAATGCTTTGTGTCACAACACCTACCATGCGGATATTGTGGAATGGGGACCCGATGGAAGATTTCCGACCTTCTCGAGGTATTCGCCAAGGTGACCCCCTTTCCCCGTACATATTTGTTATGTGTATGGAACGCTTAGCTCATATCATTGAAGAGGCAGTAGGTGCAAAGTCGTGGAAACCAATTGAATGTAGCAGAGGGGGCCCTAAACTCTCAAATATTTTCTTTGCGGATGACGTGGTTCTCTTTGCCGAAGCATCATTGGAACAGGCACAGGTTGTGAGGAAGTGCCTTGATAGGTTTTGTCAAGCTTCTGGAGAGTTGGTTTCTTTTACAAAATCAAGAGTTTTCTTCTCCACCAACGTGGACGAGCTACAGGGTGCAAGAATAAGTGAGTGCCTACAAATAGAGTCTACGAATGACTTGGGCTTTTATCTCGGGATGCCGACTATCCATGGACGCATTACTAAGGCAACCTATAGCCACATACTTGACAAGATGAATACTAAGTTGCAAGGATGGAAGTCTAAGTGCTTGTCCCTTGCAGGGAGAATTACACTTACTAAATCGGTGTTATCCTCCTTGTCTTACTACTCAATGCAAACTGCTAAGATTCCCCGACTCTTCTTGTGGGGAGGCTCCAATGAGGAACGAAAAGTTCATCTTGTGTCATGGGAGAATGTACAAAAGGATAGAAAGGATGGAGGACTAGGCATAAGATCGATGAGACAAGTGAACGCGGCGTTCCTAACCAAGCTTGGATGGAGAGCATTGTCGGAACCACACTCCTTATGGTCTCAGGTCCTAAGGGCAAAGTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_470407.p1 GENE.S_Transcript_470407~~S_Transcript_470407.p1 ORF type:internal len:615 (+),score=59.97,RVT_1|PF00078.23|8.9e-42 S_Transcript_470407:2-1843(+)
KPIVPFLKDFASQLQDWNQNVFGNIYRKKKILWARLSGIQRCLAESGNRYLFKKEAQLRRELDEVLDQEATLWYQKSRQEAIRDGDRNTTFFHTLTIIRRRRNRVEALRNNTNEWITNSGELKTMMLNYFQGLYCEQGGSKEGELPSDFFPPLTAGMCEKLNRPFTVSDIRAVVESMHPYKAPGPDGFQAIFFQKKWDVVGESLCDTVLRVLQGKIFPEGLNETFVVLIPKVDTPERVSQFRPISLCNVVYKVITKAIVNRLKPLLPHMISPTQGAFVPGRQITDNIIIVQEAIHTMRRKKGATGFMAIKIDLEKAYDRLRWEFIKDTLQEMQIPILLREVIMLCVTTPTMRILWNGDPMEDFRPSRGIRQGDPLSPYIFVMCMERLAHIIEEAVGAKSWKPIECSRGGPKLSNIFFADDVVLFAEASLEQAQVVRKCLDRFCQASGELVSFTKSRVFFSTNVDELQGARISECLQIESTNDLGFYLGMPTIHGRITKATYSHILDKMNTKLQGWKSKCLSLAGRITLTKSVLSSLSYYSMQTAKIPRLFLWGGSNEERKVHLVSWENVQKDRKDGGLGIRSMRQVNAAFLTKLGWRALSEPHSLWSQVLRAKY

Click here to download the sequence:
Link to NCBI Protein BLAST