Transcript Information: S_Transcript_470408.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value4E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89081175682613
Replicate 20.27693878105667
Replicate 30.11574938964603
Condition 2: 8 Hour
Replicate 10.13384136182301
Replicate 20.093606061254086
Replicate 30.13378147032415
Condition 3: 24 Hour
Replicate 10.22850296538278
Replicate 20.14224149524904
Replicate 30.36936048292011


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_470408.p1 GENE.S_Transcript_470408~~S_Transcript_470408.p1 ORF type:5prime_partial len:478 (+),score=67.04,zf-RVT|PF13966.2|7.6e-18,RVT_3|PF13456.2|2.9e-16,RVT_3|PF13456.2|1.3e+03 S_Transcript_470408:2-1435(+)
TTGGACATGTTTGTGGTCAAGGACTCGTCGTCTCATGCTTGGAAAGGCATTTGCAAGAATGCGACAGTTATTCAAAAAGGGGCTCGCGTTAATCTCGGAAACGGAAAGACAACTCTGTTTTGGGATCACTGTTGGGCAAGTGAGAAGCCACTCTCATCCTTCGCTCTAAGGGAAATACCGCTTGAGGAGCAAGATCGGACGGTGGAGGAGTACTGGTCTTCACAAGGAGATTGGATGTGGGACCAATTCTCTGATTTATTTCCTGAAGAGGTGCTAAAAACTATTGCCACCCACTCTCTTATCCCAGGGGACGAGGAGATGGACGCGCTCTATTGGGGAGGAACCTCTTCAGGTCAGTTCTCCATAAATTCTGCCCTCAAAATTATCAAGGGTGAGGAACATGAAGGTCGTGATACTTGGTGGAAGCTGGCTTGGCAAATTCCTGTGTCTCGAAGAGTTCGTGTTTTTATGTGGCTTGTCTTGCAAGACCGCATACTTTCTAATGCCAACAGAGTTAGGCGACAATTAAGTGATGACCCAAGATGCACCTCTTGTGGAGCAAGTGAAGAAACCACGTTGCATATCCTCCGAGATTGCCCCCATGCGCTAGCCTTATGGCGGAATCGAGGATATAGTACATCAAGCTCCATGTTCTCCAACCCATCACTTAAACATTGGGTGGTGGACCAGTTACAGAACCCCTCCAACTCAAGCCTTAGTGAAGGGGCGATGAAGTTCTCAGTAACCCTCTGGTGGATCTGGAAATGGCGGAATTGTAGGATTTTTGGAAAGGAAAATGAAATCCCTTTATACCAAGCAGGCTTCCTAGCTCGCCGGTTTGAAGAAATGAAGAATGCCATGCAACGGGATGACCTCCTGTTCCGAAATAATCGAATCATAACTAGAGAAGCCTTAATTCAATGGAAACCACCACCTGAGGGATGGCTCATGTTGAACACTGATGGAGCTTCTAAGGGAAACCCAGGTGTCTCGGGAGGGGGAGGTTTAATAAGGGACTCAACAGGCAAGATGGTGGTGGGATTCGGAGCTGCGTATGGTATTTGTACTGTTACTCGAGCAGAATTGATGGCGGTTTGGCAAGGGCTGCAAATGGCAAGGGCAAGGGGAATTACTAAGCTCCTGGTTTGTTTGGACTCGGCAGTTGTGGTAAGAATGCTAAATCAAGAAGGTGGCAACCCTGCCATGTTTCATTACGCGAAGAAAAAATGCAAACAGTTGATGGGAGATCCTGGATGGCGCGTCAAAGTGGAGCACTGTTTTAGAGAAGCCAACAGAGCGGCTGATTGGTTGGCAAATGCGGGCATTGAGTGGGGGGTACGGCGGCAGGAAGTGGAAACCCCACACCATGATCTTGCAAGAATCATTTCTGAGGAGGCGCGGGGAGTTTCGTGGCCGAGGATGGTGACTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_470408.p1 GENE.S_Transcript_470408~~S_Transcript_470408.p1 ORF type:5prime_partial len:478 (+),score=67.04,zf-RVT|PF13966.2|7.6e-18,RVT_3|PF13456.2|2.9e-16,RVT_3|PF13456.2|1.3e+03 S_Transcript_470408:2-1435(+)
LDMFVVKDSSSHAWKGICKNATVIQKGARVNLGNGKTTLFWDHCWASEKPLSSFALREIPLEEQDRTVEEYWSSQGDWMWDQFSDLFPEEVLKTIATHSLIPGDEEMDALYWGGTSSGQFSINSALKIIKGEEHEGRDTWWKLAWQIPVSRRVRVFMWLVLQDRILSNANRVRRQLSDDPRCTSCGASEETTLHILRDCPHALALWRNRGYSTSSSMFSNPSLKHWVVDQLQNPSNSSLSEGAMKFSVTLWWIWKWRNCRIFGKENEIPLYQAGFLARRFEEMKNAMQRDDLLFRNNRIITREALIQWKPPPEGWLMLNTDGASKGNPGVSGGGGLIRDSTGKMVVGFGAAYGICTVTRAELMAVWQGLQMARARGITKLLVCLDSAVVVRMLNQEGGNPAMFHYAKKKCKQLMGDPGWRVKVEHCFREANRAADWLANAGIEWGVRRQEVETPHHDLARIISEEARGVSWPRMVTS*

Click here to download the sequence:
Link to NCBI Protein BLAST