Transcript Information: S_Transcript_47042.p1


Annotated TAIR IDAT2G21270.3
Annotated Gene Nameubiquitin fusion degradation 1
Annotated Gene Symbol(s)UFD1
Annotation TypeOrtholog
Chromosome Positionchr2:9107841-9110012 | Forward length=340
E-Value9.4E-167
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 164.714223500454
Replicate 257.966211073471
Replicate 358.764742924764
Condition 2: 8 Hour
Replicate 160.002495737026
Replicate 257.041266252222
Replicate 359.313662900818
Condition 3: 24 Hour
Replicate 166.484428014852
Replicate 257.43375852888
Replicate 368.929810796591


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47042.p1 GENE.S_Transcript_47042~~S_Transcript_47042.p1 ORF type:complete len:322 (+),score=70.10,UFD1|PF03152.10|1.9e-81 S_Transcript_47042:55-1020(+)
ATGTATTTCAACGGTTACGGATACCATGGAGGTTCTTTTGAGCAGTCATATCGATGCTACCCTGCATCATTTATTGAAAAGCCGCAAATTGAAAGTGGTGATAAAATTATAATGCCTCCGTCAGCCCTTGACCGACTCGCTTCTCTTCATATTGACTACCCTATGCTATTCGAATTGCAAAATGATGCTGCCAACCGAGTCTCCCATTGCGGAGTCCTAGAGTTCATTGCAGAAGAAGGGATGATTTATATGCCATACTGGATGATGGAGAACATGCTTTTGCAAGAGGGTGACATTGTTCGGGTTAAAAATGTTACTCTTCCGAAGGGAAAATATGTTAAACTTCAACCTCATACAAAAGACTTCTTGGATATCTCTAATCCCAAAGCAATTTTAGAGACTACACTGAGGAACTATTCCTGCTTAACCACTGGAGACAGCATCATGGTTGCATACAATAACAAGAAGTATTACATAGACATTATAGAGACAAGGCCTGCTAATGCAATTAGTATAATTGAGACTGATTGTGAGGTGGACTTTGCACCTCCTCTTGATTATAAGGAACCTGAAAAACCTGCTGTATCTGGTTTAAGCAAGGCATCAGCTCAAGCTGAAGAGACTCCAGTTGAAACAGAGCCCAGATTTAATCCATTTACAGGGGCGGGAAGACGTTTGGATGGGAAGCCAGCAACAAATGAGCCTTCTCCGTTTTCTGGTGCTGCATCTAGAGATAAGCAGCCTGCTGTTGCGACTAGGGGTGCACAGCCTGCTGCAGGATCCAGTTCTCAGAGCAAAAACAGTCAAACACAAGGAAAGCTTGTTTTTGGTGCAAGTGGTAGTCATGCTCCTAAGGAGGCTCAAAAGGAACCTTCCAAACCAAGCCAACAGGAACCTCAGAAAGAAGAGCCAAAGTTTCAGGTTTTTTTCAGGGAAAAAGTATTCATTGAGGGGTTGATTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47042.p1 GENE.S_Transcript_47042~~S_Transcript_47042.p1 ORF type:complete len:322 (+),score=70.10,UFD1|PF03152.10|1.9e-81 S_Transcript_47042:55-1020(+)
MYFNGYGYHGGSFEQSYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELQNDAANRVSHCGVLEFIAEEGMIYMPYWMMENMLLQEGDIVRVKNVTLPKGKYVKLQPHTKDFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETRPANAISIIETDCEVDFAPPLDYKEPEKPAVSGLSKASAQAEETPVETEPRFNPFTGAGRRLDGKPATNEPSPFSGAASRDKQPAVATRGAQPAAGSSSQSKNSQTQGKLVFGASGSHAPKEAQKEPSKPSQQEPQKEEPKFQVFFREKVFIEGLIL*

Click here to download the sequence:
Link to NCBI Protein BLAST