Transcript Information: S_Transcript_47062.p2


Annotated TAIR IDAT3G16610.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5656371-5658335 | Reverse length=654
E-Value6E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3218378096944
Replicate 21.6072230803488
Replicate 31.7709912133259
Condition 2: 8 Hour
Replicate 12.9657827593364
Replicate 22.6668428842058
Replicate 31.4116455367537
Condition 3: 24 Hour
Replicate 11.3743469745738
Replicate 21.5009146739303
Replicate 32.1714342865332


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47062.p2 GENE.S_Transcript_47062~~S_Transcript_47062.p2 ORF type:3prime_partial len:302 (+),score=43.44,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|0.0011,PPR|PF01535.16|6.5e+03,PPR|PF01535.16|0.019,PPR|PF01535.16|0.00066,PPR|PF01535.16|7.5,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|6.3e-05,PPR_2|PF13041.2|0.4,PPR_2|PF13041.2|1.3e-06,PPR_2|PF13041.2|2.1e+03 S_Transcript_47062:5071-5973(+)
ATGATACAGTGTATCACTCAATTCAACCATTATTTTAACCCTTCCCTTCCTGTTATCACACGTCGCTTATTTCATGTTGTCCCAATTGAGGAATACACCCAGTTGCTAGAAACTTGCATTCAATCTAAATCACTCAAACATGGCAAGGCAATCCATCAGCATCTCCTTAGGAACAACAATGGCATCATTAGCTCCTTTGTTCTCGAAAAACTTACCCGTTTGTACGTTATATCTGGACAACTTGATTATGCACGCTGTTTGTTCGATGCAATTCCAGAACCAACAGTTATATTGTGGAATTTGATGATCAGGGCATATGCCTGGAATGGACCATTTGAATGTTCAATTGATTTGTATACTAGGATGTGGGTGTCTGGTAGTGTTCCCACCAAATTTACATTCCCTTTTGCTCTTAAGGCGTGTGCGAGTTTGAATGCAGTAGAATATGGAGAAGAGATTCATAATCATGTTGTAAGACTTGGGCTTATGTCAGATGTTTACATCTCCACTGCTTTGGTTGATTTGTATGCCAAGTGTGGAAGACTAGTTCGAGCCCAGAATGTGTTTAACAACATGCCATGTAGGGATATTGTGGCATGGAATGCCATGATTGGTGGCTTTTCAGTTCATGGGCTTTATGCTGACATGATGAGGTTGGTGGTTGGCATGCAGGAGGCTGGTATAAGCCCAAACTCATCAAGTGTTGTGACAATATTACCAGCAGTTGCACAAGCTAGTGCTTTGAGTGATGGGAAGGCTGTACATGCATATTCAATGAGACGGAACTATAGTCATGAAGTTGTGGTGGGCACAGGGCTTTTGGACATGTATGGAAAATGTGGGTGTATATCCTATGCTAGGACAATCTTTGACCTTTTGGTTATTAGGACTGAAATCACTTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47062.p2 GENE.S_Transcript_47062~~S_Transcript_47062.p2 ORF type:3prime_partial len:302 (+),score=43.44,PPR|PF01535.16|5.9e+02,PPR|PF01535.16|0.0011,PPR|PF01535.16|6.5e+03,PPR|PF01535.16|0.019,PPR|PF01535.16|0.00066,PPR|PF01535.16|7.5,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|6.3e-05,PPR_2|PF13041.2|0.4,PPR_2|PF13041.2|1.3e-06,PPR_2|PF13041.2|2.1e+03 S_Transcript_47062:5071-5973(+)
MIQCITQFNHYFNPSLPVITRRLFHVVPIEEYTQLLETCIQSKSLKHGKAIHQHLLRNNNGIISSFVLEKLTRLYVISGQLDYARCLFDAIPEPTVILWNLMIRAYAWNGPFECSIDLYTRMWVSGSVPTKFTFPFALKACASLNAVEYGEEIHNHVVRLGLMSDVYISTALVDLYAKCGRLVRAQNVFNNMPCRDIVAWNAMIGGFSVHGLYADMMRLVVGMQEAGISPNSSSVVTILPAVAQASALSDGKAVHAYSMRRNYSHEVVVGTGLLDMYGKCGCISYARTIFDLLVIRTEITW

Click here to download the sequence:
Link to NCBI Protein BLAST