Transcript Information: S_Transcript_470635.p1


Annotated TAIR IDAT5G07040.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2190344-2190823 | Forward length=159
E-Value4.9E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21290400988144
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.51180936761119
Replicate 20
Replicate 30.3410535616797
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_470635.p1 GENE.S_Transcript_470635~~S_Transcript_470635.p1 ORF type:5prime_partial len:125 (+),score=14.56,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|2.8e-13,zf-RING_11|PF17123.1|4.8e-09,zf-RING_11|PF17123.1|2.5e+03,zf-rbx1|PF12678.3|1.2e-07,zf-C3HC4_2|PF13923.2|3.2e+03,zf-C3HC4_2|PF13923.2|2.5e-07,zf-C3HC4|PF00097.21|9.9e-06 S_Transcript_470635:2-376(+)
TTTGTTTGCCTCATATACTTCATAGTCAAGACTATATGCTACAGGGCAAGGACCAGAACTGCTGCAAGTATTGCACTTGCACCAGCAATTTCAGCAATACACAATCAGAGACTTGCTAACGGCCTAGACCCGTCGATAATTGAATCCTACCCCAAGGTGGTCTTAGGTGAGAGCCGACGACTACCAAAACCAGATGATAAAAGCTGTCCAATATGCTTGGGTGAGTACCAGCCTAAGGAGATTTTAAGGACATTACCAGATTGTAAACATTGTTTTCATGCTGAATGCATTGATGAATGGCTTCACTTGAATGCCTCATGTCCTGTTTGTAGAAATTCTCCTTCTCCAATGATGGAAAATACGGAGAGAGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_470635.p1 GENE.S_Transcript_470635~~S_Transcript_470635.p1 ORF type:5prime_partial len:125 (+),score=14.56,zf-RING_2|PF13639.2|1.1e+04,zf-RING_2|PF13639.2|2.8e-13,zf-RING_11|PF17123.1|4.8e-09,zf-RING_11|PF17123.1|2.5e+03,zf-rbx1|PF12678.3|1.2e-07,zf-C3HC4_2|PF13923.2|3.2e+03,zf-C3HC4_2|PF13923.2|2.5e-07,zf-C3HC4|PF00097.21|9.9e-06 S_Transcript_470635:2-376(+)
FVCLIYFIVKTICYRARTRTAASIALAPAISAIHNQRLANGLDPSIIESYPKVVLGESRRLPKPDDKSCPICLGEYQPKEILRTLPDCKHCFHAECIDEWLHLNASCPVCRNSPSPMMENTERA*

Click here to download the sequence:
Link to NCBI Protein BLAST