Transcript Information: S_Transcript_470637.p1


Annotated TAIR IDAT1G09190.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2966263-2967717 | Reverse length=484
E-Value6.6E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.30589656592162
Replicate 20.25359528227028
Replicate 30
Condition 2: 8 Hour
Replicate 10.98047771573025
Replicate 20.5142953710282
Replicate 30.98003897034397
Condition 3: 24 Hour
Replicate 11.2554530741721
Replicate 20.52100716267465
Replicate 30.57981711276129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_470637.p1 GENE.S_Transcript_470637~~S_Transcript_470637.p1 ORF type:internal len:87 (+),score=17.98,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|3.8e-09,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|2.2e-09,PPR_1|PF12854.3|8.3e-08,PPR_1|PF12854.3|5.7e-07,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|4.2e-05 S_Transcript_470637:1-258(+)
GAAGGAATGCCTCACAGAGATGTGATCATTTGGAACTTAATGATTCGTGGATTTTGTAAGGTTGGGGATGTTGATATGGGTTTGCTTCTTTTTAGGCAGATGAGAGTACGGAACATCGTTTCATGGAATTCAATGATATCTTCATTGGCTAAGTGTGGGAGGGACAATGAAGCTTTGGGACTATTCCATGAAATGCGAATTGATGGTGCTTTCGAACCAGATGAAGCTACTGTTGTCACTGTTCTACCTGTATGTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_470637.p1 GENE.S_Transcript_470637~~S_Transcript_470637.p1 ORF type:internal len:87 (+),score=17.98,PPR|PF01535.16|1.7e-08,PPR|PF01535.16|3.8e-09,PPR_2|PF13041.2|1.9e-07,PPR_2|PF13041.2|2.2e-09,PPR_1|PF12854.3|8.3e-08,PPR_1|PF12854.3|5.7e-07,PPR_3|PF13812.2|0.00023,PPR_3|PF13812.2|4.2e-05 S_Transcript_470637:1-258(+)
EGMPHRDVIIWNLMIRGFCKVGDVDMGLLLFRQMRVRNIVSWNSMISSLAKCGRDNEALGLFHEMRIDGAFEPDEATVVTVLPVCA

Click here to download the sequence:
Link to NCBI Protein BLAST