Transcript Information: S_Transcript_470886.p1


Annotated TAIR IDAT2G39730.1
Annotated Gene Namerubisco activase
Annotated Gene Symbol(s)RCA
Annotation TypeOrtholog
Chromosome Positionchr2:16570951-16573345 | Reverse length=474
E-Value1.5E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15841072163798
Replicate 20
Replicate 30.10977819097381
Condition 2: 8 Hour
Replicate 10.25387369425158
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.13002906839639
Replicate 20.4047109210062
Replicate 30.60052486678848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_470886.p1 GENE.S_Transcript_470886~~S_Transcript_470886.p1 ORF type:5prime_partial len:168 (+),score=12.78 S_Transcript_470886:3-506(+)
CCCCGTGTCCCCATCATCGTCACCGGCAACGACTTCTCCACGCTGTACGCGCCGCTCATCCGTGACGGGCGTATGGAGAAGTTCTACTGGGCTCCCACCCGCGACGACCGTGTCGGCGTCTGCAAGGGTATCTTCCGCACCGACAACGTCCCCGACGAGGACATCGTCAAGATCGTCGACAGCTTCCCAGGCCAATCCATCGATTTCTTCGGCGCTCTTCGTGCCCGTGTTTACGACGACGAGGTGCGCAAGTGGGTGTCGGACACGGGTGTGGAGAACATTGGCAAGAGGCTGGTGAACTCGAGGGAGGGCCCACCGGAGTTCGAGCAGCCCAAGATGACGATCGAAAAGCTCATGGAGTACGGATACATGCTTGTGAAGGAGCAGGAGAACGTCAAGCGTGTGCAGCTGGCTGAGCAGTACTTGAGCGAGGCTGCTCTTGGTGACGCTAACTCCGACGCCATGAAGACTGGTTCCTTCTACGGTTCTGCGCCATCCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_470886.p1 GENE.S_Transcript_470886~~S_Transcript_470886.p1 ORF type:5prime_partial len:168 (+),score=12.78 S_Transcript_470886:3-506(+)
PRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYGSAPSS*

Click here to download the sequence:
Link to NCBI Protein BLAST