Transcript Information: S_Transcript_47115.p1


Annotated TAIR IDAT3G54020.1
Annotated Gene NameArabidopsis Inositol phosphorylceramide synthase 1
Annotated Gene Symbol(s)AtIPCS1
Annotation TypeOrtholog
Chromosome Positionchr3:20006098-20008020 | Forward length=305
E-Value1.4E-177
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.346662993477
Replicate 227.128566011808
Replicate 323.011631427574
Condition 2: 8 Hour
Replicate 143.810469533687
Replicate 245.351995278721
Replicate 329.108045672059
Condition 3: 24 Hour
Replicate 121.910880117454
Replicate 222.526870116672
Replicate 323.926652396394


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47115.p1 GENE.S_Transcript_47115~~S_Transcript_47115.p1 ORF type:complete len:331 (+),score=40.85,PAP2_C|PF14360.2|1.8e+02,PAP2_C|PF14360.2|1.3e-23 S_Transcript_47115:119-1111(+)
ATGTGTTGTAAAGTAACATGGCCTTGGTTGTCTGTAGCAAAAAAAATGTCGCTTTACATAGGTCGCGAAGCTTCAAAGCTATGGAAGAGGTTCTGTGCAGAAGTATCCACGGAAATCAATCTTCTTGCAGAAAATTGGAAATACATTCTTGGAGGACTTATTTTTCAGTATATCCATGGATTGGCTGCTCGAGGTGTTCATTATATACATCGGCCTGGTCCAACACTTCAGGATGCCGGCTTCATCCTGCTTCCCGAGCTTGGACAAGACAAGGCTTACATTAGTGAAACTGTTTTTACTTCCATCTTTATATCCTTTTTCGTGTGGACATTTCATCCGTTCATTCTCAAAAGTAAAAAGATCTACACAGTGCTGGTGTGGTGCAGGGTTCTTGCTTTTTTAGTTGCATCACAAATTCTTAGGATTATCACATTCTACTCTACTCAGCTTCCTGGTCCAAATTACCACTGCCGTGAGGGCTCAAAACTTGCTACTCTCCCTCCGCCACACAGTGCACTTGAGGTCCTTTTAATTAACTTCCCGCGAGGGGTACTTTATGGATGTGGTGACCTCATTTTTTCATCTCATATGATCTTTACACTGGTTTTCATCCGAACATATCACAAATATGGCACAAAGAGGTGGATTAAGCAATTGGGTTGGCTACTTGCTGTGGTCCAGAGCTTATTGATCATAGCTTCTCGGAAGCATTATTCAGTTGATGTGGTCGTAGCATGGTATACTGTCAATCTAGTGGTATTTTTTGTTGACAAGAAACTGCCAGAAATGCCTGACCGATCCAGCAGTGGTGCTTCTCTTTTGCTTCCGCTTAGCAACAAAGAAAAGGATGGCAGGAACAAGGAGGAAAATCACAAGCTTTTGAATGGAACTTCGGGAGATCCCATGGATCGAAGGCAAAGAAATGGAATAAATGGCAAGATTTTGGAGGATGGACTTGCAGTGCACGGTGATGCTGCCATTAACGGGGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47115.p1 GENE.S_Transcript_47115~~S_Transcript_47115.p1 ORF type:complete len:331 (+),score=40.85,PAP2_C|PF14360.2|1.8e+02,PAP2_C|PF14360.2|1.3e-23 S_Transcript_47115:119-1111(+)
MCCKVTWPWLSVAKKMSLYIGREASKLWKRFCAEVSTEINLLAENWKYILGGLIFQYIHGLAARGVHYIHRPGPTLQDAGFILLPELGQDKAYISETVFTSIFISFFVWTFHPFILKSKKIYTVLVWCRVLAFLVASQILRIITFYSTQLPGPNYHCREGSKLATLPPPHSALEVLLINFPRGVLYGCGDLIFSSHMIFTLVFIRTYHKYGTKRWIKQLGWLLAVVQSLLIIASRKHYSVDVVVAWYTVNLVVFFVDKKLPEMPDRSSSGASLLLPLSNKEKDGRNKEENHKLLNGTSGDPMDRRQRNGINGKILEDGLAVHGDAAINGV*

Click here to download the sequence:
Link to NCBI Protein BLAST