Transcript Information: S_Transcript_471187.p1


Annotated TAIR IDAT5G62140.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to 60 proteins in 24 species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24954563-24955376 | Reverse length=241
E-Value1E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.59939191971127
Replicate 20.59629160966256
Replicate 30.083075387763967
Condition 2: 8 Hour
Replicate 10.57636190046305
Replicate 20.50387046485871
Replicate 30.9601733155397
Condition 3: 24 Hour
Replicate 10.29520112825127
Replicate 20.30626772400469
Replicate 30.34083843790697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_471187.p1 GENE.S_Transcript_471187~~S_Transcript_471187.p1 ORF type:complete len:222 (+),score=25.85 S_Transcript_471187:16-681(+)
ATGTCATCTAATTTGATCATCAATTGCCCAAAATTTTACTGCCATAAAAACCCCAAAAGCGAAATTAGAAAAGTTTTTTGCAAAGATAGTATAAGGGTAAGGACATTGGATGGATCAAAGCTGAGGATTTCCCATTGGAGTTGTGATTATAATGCAAGTGGTGGGAGAGCGACAGGGAAGAGAGTGATCAAATTCATCAAGGGATTAGATAAAGATTTCGTCACCTCCGGGAAGTCGTTGATGTACGAGGTGGATCTCGAGACGCTGCACATCCCGCAGGTGAATTCTACCACGGCCACAATTCACGGTTGGGCCCCATTTCCACCCTTCATGGTGATTGACGTCGTCCCAGAGCTCCTCCGGGGGTTTGTTTTTGAGGATTCCGGAAAGGTGGATATGGAGCTTAGAGCAAAGTTTTTGATAACGGTTGGCGATGGTTACAAGGCCCCTCCTTTGGTTGTAGACATGGCATTAACATCTGAAGAGTTGAAGGGAGCATCAATATTAAGCAGTAATATAAGAGGGAAGAGACTAAGTAAAGATGGCAAGTGCACGCTTGTTGGTGTTGCTAGGGTTGATCCAGTTGCCGATCCTCACATAAATGCTTTGCTTTGCCTCCCTTCTGAATGCCTCGCCCTTATAAATTTTGCTATATCCTTCTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_471187.p1 GENE.S_Transcript_471187~~S_Transcript_471187.p1 ORF type:complete len:222 (+),score=25.85 S_Transcript_471187:16-681(+)
MSSNLIINCPKFYCHKNPKSEIRKVFCKDSIRVRTLDGSKLRISHWSCDYNASGGRATGKRVIKFIKGLDKDFVTSGKSLMYEVDLETLHIPQVNSTTATIHGWAPFPPFMVIDVVPELLRGFVFEDSGKVDMELRAKFLITVGDGYKAPPLVVDMALTSEELKGASILSSNIRGKRLSKDGKCTLVGVARVDPVADPHINALLCLPSECLALINFAISFS*

Click here to download the sequence:
Link to NCBI Protein BLAST