Transcript Information: S_Transcript_47120.p1


Annotated TAIR IDAT3G54020.1
Annotated Gene NameArabidopsis Inositol phosphorylceramide synthase 1
Annotated Gene Symbol(s)AtIPCS1
Annotation TypeOrtholog
Chromosome Positionchr3:20006098-20008020 | Forward length=305
E-Value3.2E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2858420732224
Replicate 24.0749215541584
Replicate 36.4719891797332
Condition 2: 8 Hour
Replicate 111.534841728264
Replicate 211.864753500224
Replicate 311.923376496718
Condition 3: 24 Hour
Replicate 110.432516917672
Replicate 25.5613046875998
Replicate 35.1242675968178


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47120.p1 GENE.S_Transcript_47120~~S_Transcript_47120.p1 ORF type:complete len:379 (+),score=41.30,PAP2_C|PF14360.2|4.2e+03,PAP2_C|PF14360.2|2.2e+02,PAP2_C|PF14360.2|1.6e-23 S_Transcript_47120:119-1255(+)
ATGTGTTGTAAAGTAACATGGCCTTGGTTGTCTGTAGCAAAAAAAATGTCGCTTTACATAGGTCGCGAAGCTTCAAAGGTATATATCGGCTTCCCTTTCCTCCTTTTCGTCGTTGTGTATTTCTTTGTGTGGAAGATCTTGCTTTCAATTAAATTTGTTTCCGATTTTGGGAGTTTGGTTTTCCTTATTTTTAGTTTTTTTTTTCTGGCTGTTGTTATGAAGCTATGGAAGAGGTTCTGTGCAGAAGTATCCACGGAAATCAATCTTCTTGCAGAAAATTGGAAATACATTCTTGGAGGACTTATTTTTCAGTATATCCATGGATTGGCTGCTCGAGGTGTTCATTATATACATCGGCCTGGTCCAACACTTCAGGATGCCGGCTTCATCCTGCTTCCCGAGCTTGGACAAGACAAGGCTTACATTAGTGAAACTGTTTTTACTTCCATCTTTATATCCTTTTTCGTGTGGACATTTCATCCGTTCATTCTCAAAAGTAAAAAGATCTACACAGTGCTGGTGTGGTGCAGGGTTCTTGCTTTTTTAGTTGCATCACAAATTCTTAGGATTATCACATTCTACTCTACTCAGCTTCCTGGTCCAAATTACCACTGCCGTGAGGGCTCAAAACTTGCTACTCTCCCTCCGCCACACAGTGCACTTGAGGTCCTTTTAATTAACTTCCCGCGAGGGGTACTTTATGGATGTGGTGACCTCATTTTTTCATCTCATATGATCTTTACACTGGTTTTCATCCGAACATATCACAAATATGGCACAAAGAGGTGGATTAAGCAATTGGGTTGGCTACTTGCTGTGGTCCAGAGCTTATTGATCATAGCTTCTCGGAAGCATTATTCAGTTGATGTGGTCGTAGCATGGTATACTGTCAATCTAGTGGTATTTTTTGTTGACAAGAAACTGCCAGAAATGCCTGACCGATCCAGCAGTGGTGCTTCTCTTTTGCTTCCGCTTAGCAACAAAGAAAAGGATGGCAGGAACAAGGAGGAAAATCACAAGCTTTTGAATGGAACTTCGGGAGATCCCATGGATCGAAGGCAAAGAAATGGAATAAATGGCAAGATTTTGGAGGATGGACTTGCAGTGCACGGTGATGCTGCCATTAACGGGGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47120.p1 GENE.S_Transcript_47120~~S_Transcript_47120.p1 ORF type:complete len:379 (+),score=41.30,PAP2_C|PF14360.2|4.2e+03,PAP2_C|PF14360.2|2.2e+02,PAP2_C|PF14360.2|1.6e-23 S_Transcript_47120:119-1255(+)
MCCKVTWPWLSVAKKMSLYIGREASKVYIGFPFLLFVVVYFFVWKILLSIKFVSDFGSLVFLIFSFFFLAVVMKLWKRFCAEVSTEINLLAENWKYILGGLIFQYIHGLAARGVHYIHRPGPTLQDAGFILLPELGQDKAYISETVFTSIFISFFVWTFHPFILKSKKIYTVLVWCRVLAFLVASQILRIITFYSTQLPGPNYHCREGSKLATLPPPHSALEVLLINFPRGVLYGCGDLIFSSHMIFTLVFIRTYHKYGTKRWIKQLGWLLAVVQSLLIIASRKHYSVDVVVAWYTVNLVVFFVDKKLPEMPDRSSSGASLLLPLSNKEKDGRNKEENHKLLNGTSGDPMDRRQRNGINGKILEDGLAVHGDAAINGV*

Click here to download the sequence:
Link to NCBI Protein BLAST